Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 AC068418.2-201ENST00000577309 3703 ntBASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 FTLP1-201ENST00000449155 526 ntBASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 DUX4L47-201ENST00000566374 394 ntBASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 MIR4722-201ENST00000578292 60 ntBASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 MIR4706-201ENST00000582134 82 ntBASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 BNIP3P13-201ENST00000599968 566 ntBASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 SNX1-214ENST00000625244 324 ntTSL 5 BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC187A0A096LP49 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.4□□□□□ -0.11
CCDC187A0A096LP49 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.11
CCDC187A0A096LP49 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.11
CCDC187A0A096LP49 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 AC008132.1-202ENST00000342005 1389 ntBASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 AC007274.2-201ENST00000421675 662 ntBASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC187A0A096LP49 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms