Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 AC015802.1-201ENST00000588104 1449 ntBASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 AC152010.1-201ENST00000415779 2006 ntBASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 AL133267.1-201ENST00000398220 340 ntBASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 AC104457.1-201ENST00000401024 814 ntBASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 CITED2-204ENST00000618718 901 ntTSL 2 BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 TK1-203ENST00000588734 1681 ntTSL 2 BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC10.69□□□□□ -0.7
UBE2D4Q9Y2X8 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 AL122018.1-201ENST00000446607 2310 ntBASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 SYS1-203ENST00000414310 795 ntTSL 3 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 MED15P5-201ENST00000423150 992 ntBASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
UBE2D4Q9Y2X8 USP40-206ENST00000443711 628 ntTSL 2 BASIC10.68□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms