Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 AC018442.1-201ENST00000421439 2061 ntBASIC14.62□□□□□ -0.07
BRF2Q9HAW0 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.62□□□□□ -0.07
BRF2Q9HAW0 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 VDAC1P7-201ENST00000462417 847 ntBASIC14.62□□□□□ -0.07
BRF2Q9HAW0 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 AC055876.2-201ENST00000531834 546 ntBASIC14.62□□□□□ -0.07
BRF2Q9HAW0 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 AC009118.2-201ENST00000613275 655 ntBASIC14.62□□□□□ -0.07
BRF2Q9HAW0 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
BRF2Q9HAW0 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 LINC00552-201ENST00000625151 2579 ntBASIC14.61□□□□□ -0.07
BRF2Q9HAW0 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 CYMP-203ENST00000474680 1263 ntBASIC14.61□□□□□ -0.07
BRF2Q9HAW0 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 AL157414.3-201ENST00000624276 1954 ntBASIC14.61□□□□□ -0.07
BRF2Q9HAW0 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.61□□□□□ -0.07
BRF2Q9HAW0 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
BRF2Q9HAW0 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms