Protein–RNA interactions for Protein: Q9C099

LRRCC1, Leucine-rich repeat and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRCC1Q9C099 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRRCC1Q9C099 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRRCC1Q9C099 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRRCC1Q9C099 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRRCC1Q9C099 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC18.82■□□□□ 0.6
LRRCC1Q9C099 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRRCC1Q9C099 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
LRRCC1Q9C099 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRRCC1Q9C099 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRRCC1Q9C099 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRCC1Q9C099 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRRCC1Q9C099 LINC02228-204ENST00000642115 2962 ntBASIC18.81■□□□□ 0.6
LRRCC1Q9C099 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRRCC1Q9C099 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRRCC1Q9C099 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRCC1Q9C099 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC18.81■□□□□ 0.6
LRRCC1Q9C099 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRCC1Q9C099 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRCC1Q9C099 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC18.81■□□□□ 0.6
LRRCC1Q9C099 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
LRRCC1Q9C099 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRRCC1Q9C099 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRCC1Q9C099 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRCC1Q9C099 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRCC1Q9C099 AC067930.6-201ENST00000623257 4947 ntBASIC18.81■□□□□ 0.6
LRRCC1Q9C099 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRCC1Q9C099 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.81■□□□□ 0.6
LRRCC1Q9C099 ACKR1-201ENST00000368121 1240 ntBASIC18.81■□□□□ 0.6
LRRCC1Q9C099 KLF2P2-201ENST00000416807 1039 ntBASIC18.81■□□□□ 0.6
LRRCC1Q9C099 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.81■□□□□ 0.6
LRRCC1Q9C099 RPSAP52-203ENST00000622976 1023 ntBASIC18.81■□□□□ 0.6
LRRCC1Q9C099 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRCC1Q9C099 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
LRRCC1Q9C099 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRCC1Q9C099 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRCC1Q9C099 CICP23-201ENST00000605013 2741 ntBASIC18.81■□□□□ 0.6
LRRCC1Q9C099 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC18.81■□□□□ 0.6
LRRCC1Q9C099 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC18.81■□□□□ 0.6
LRRCC1Q9C099 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRRCC1Q9C099 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRCC1Q9C099 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
LRRCC1Q9C099 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRCC1Q9C099 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRCC1Q9C099 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRCC1Q9C099 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
LRRCC1Q9C099 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRCC1Q9C099 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRCC1Q9C099 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRCC1Q9C099 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC18.8■□□□□ 0.6
LRRCC1Q9C099 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRCC1Q9C099 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
LRRCC1Q9C099 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRCC1Q9C099 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRCC1Q9C099 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRCC1Q9C099 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
LRRCC1Q9C099 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRRCC1Q9C099 AC098614.1-201ENST00000368528 745 ntBASIC18.8■□□□□ 0.6
LRRCC1Q9C099 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
LRRCC1Q9C099 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC18.8■□□□□ 0.6
LRRCC1Q9C099 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.8■□□□□ 0.6
LRRCC1Q9C099 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRRCC1Q9C099 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRRCC1Q9C099 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRCC1Q9C099 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LRRCC1Q9C099 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRCC1Q9C099 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC18.8■□□□□ 0.6
LRRCC1Q9C099 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRRCC1Q9C099 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRCC1Q9C099 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRCC1Q9C099 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRCC1Q9C099 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRRCC1Q9C099 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.79■□□□□ 0.6
LRRCC1Q9C099 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRCC1Q9C099 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRCC1Q9C099 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC18.79■□□□□ 0.6
LRRCC1Q9C099 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC18.79■□□□□ 0.6
LRRCC1Q9C099 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
LRRCC1Q9C099 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
LRRCC1Q9C099 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRCC1Q9C099 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRCC1Q9C099 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
LRRCC1Q9C099 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.79■□□□□ 0.6
LRRCC1Q9C099 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
LRRCC1Q9C099 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRCC1Q9C099 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRCC1Q9C099 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRCC1Q9C099 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.79■□□□□ 0.6
LRRCC1Q9C099 LSM5-207ENST00000410044 687 ntTSL 3 BASIC18.79■□□□□ 0.6
LRRCC1Q9C099 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRCC1Q9C099 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRCC1Q9C099 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.79■□□□□ 0.6
LRRCC1Q9C099 AC093433.1-201ENST00000458048 571 ntBASIC18.79■□□□□ 0.6
LRRCC1Q9C099 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.79■□□□□ 0.6
LRRCC1Q9C099 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.79■□□□□ 0.6
LRRCC1Q9C099 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
LRRCC1Q9C099 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC18.79■□□□□ 0.6
LRRCC1Q9C099 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRCC1Q9C099 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
LRRCC1Q9C099 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRCC1Q9C099 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms