Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLCC1Q96S66 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CLCC1Q96S66 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13□□□□□ -0.33
CLCC1Q96S66 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CLCC1Q96S66 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLCC1Q96S66 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13□□□□□ -0.33
CLCC1Q96S66 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CLCC1Q96S66 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13□□□□□ -0.33
CLCC1Q96S66 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13□□□□□ -0.33
CLCC1Q96S66 KRT8P48-201ENST00000515599 1220 ntBASIC13□□□□□ -0.33
CLCC1Q96S66 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
CLCC1Q96S66 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13□□□□□ -0.33
CLCC1Q96S66 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13□□□□□ -0.33
CLCC1Q96S66 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13□□□□□ -0.33
CLCC1Q96S66 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13□□□□□ -0.33
CLCC1Q96S66 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CLCC1Q96S66 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CLCC1Q96S66 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13□□□□□ -0.33
CLCC1Q96S66 AC026120.1-201ENST00000611536 926 ntBASIC13□□□□□ -0.33
CLCC1Q96S66 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLCC1Q96S66 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CLCC1Q96S66 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLCC1Q96S66 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLCC1Q96S66 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CLCC1Q96S66 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLCC1Q96S66 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLCC1Q96S66 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLCC1Q96S66 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLCC1Q96S66 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CLCC1Q96S66 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLCC1Q96S66 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13□□□□□ -0.33
CLCC1Q96S66 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLCC1Q96S66 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLCC1Q96S66 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLCC1Q96S66 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLCC1Q96S66 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC12.99□□□□□ -0.33
CLCC1Q96S66 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLCC1Q96S66 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLCC1Q96S66 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLCC1Q96S66 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC12.99□□□□□ -0.33
CLCC1Q96S66 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC12.99□□□□□ -0.33
CLCC1Q96S66 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLCC1Q96S66 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CLCC1Q96S66 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLCC1Q96S66 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CLCC1Q96S66 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLCC1Q96S66 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC12.99□□□□□ -0.33
CLCC1Q96S66 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLCC1Q96S66 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLCC1Q96S66 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLCC1Q96S66 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLCC1Q96S66 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLCC1Q96S66 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CLCC1Q96S66 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLCC1Q96S66 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLCC1Q96S66 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLCC1Q96S66 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC12.99□□□□□ -0.33
CLCC1Q96S66 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CLCC1Q96S66 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC12.99□□□□□ -0.33
CLCC1Q96S66 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
CLCC1Q96S66 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC12.99□□□□□ -0.33
CLCC1Q96S66 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CLCC1Q96S66 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC12.99□□□□□ -0.33
CLCC1Q96S66 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CLCC1Q96S66 AC092865.5-201ENST00000545435 363 ntBASIC12.99□□□□□ -0.33
CLCC1Q96S66 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC12.99□□□□□ -0.33
CLCC1Q96S66 AC005829.1-201ENST00000570002 483 ntBASIC12.99□□□□□ -0.33
CLCC1Q96S66 MIR3687-2-201ENST00000577708 61 ntBASIC12.99□□□□□ -0.33
CLCC1Q96S66 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLCC1Q96S66 AC010327.4-202ENST00000591484 748 ntBASIC12.99□□□□□ -0.33
CLCC1Q96S66 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CLCC1Q96S66 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC12.99□□□□□ -0.33
CLCC1Q96S66 MIR3687-1-201ENST00000614492 61 ntBASIC12.99□□□□□ -0.33
CLCC1Q96S66 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.99□□□□□ -0.33
CLCC1Q96S66 GOLGA2P9-201ENST00000596977 1937 ntBASIC12.99□□□□□ -0.33
CLCC1Q96S66 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLCC1Q96S66 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLCC1Q96S66 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC12.99□□□□□ -0.33
CLCC1Q96S66 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
CLCC1Q96S66 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLCC1Q96S66 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CLCC1Q96S66 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CLCC1Q96S66 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLCC1Q96S66 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC12.99□□□□□ -0.33
CLCC1Q96S66 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLCC1Q96S66 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.99□□□□□ -0.33
CLCC1Q96S66 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLCC1Q96S66 AL356585.2-201ENST00000625078 2396 ntBASIC12.99□□□□□ -0.33
CLCC1Q96S66 LINC01230-201ENST00000625222 3017 ntBASIC12.99□□□□□ -0.33
CLCC1Q96S66 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLCC1Q96S66 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLCC1Q96S66 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLCC1Q96S66 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.99□□□□□ -0.33
CLCC1Q96S66 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
CLCC1Q96S66 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLCC1Q96S66 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CLCC1Q96S66 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLCC1Q96S66 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CLCC1Q96S66 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CLCC1Q96S66 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms