Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
NEK1Q96PY6 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NEK1Q96PY6 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NEK1Q96PY6 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC18.09■□□□□ 0.49
NEK1Q96PY6 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NEK1Q96PY6 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NEK1Q96PY6 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NEK1Q96PY6 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.09■□□□□ 0.49
NEK1Q96PY6 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NEK1Q96PY6 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.09■□□□□ 0.49
NEK1Q96PY6 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NEK1Q96PY6 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NEK1Q96PY6 PIN1P1-201ENST00000412108 996 ntBASIC18.09■□□□□ 0.49
NEK1Q96PY6 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC18.09■□□□□ 0.49
NEK1Q96PY6 ELK1P1-201ENST00000485699 580 ntBASIC18.09■□□□□ 0.49
NEK1Q96PY6 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.09■□□□□ 0.49
NEK1Q96PY6 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.09■□□□□ 0.49
NEK1Q96PY6 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.09■□□□□ 0.49
NEK1Q96PY6 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.09■□□□□ 0.49
NEK1Q96PY6 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.09■□□□□ 0.49
NEK1Q96PY6 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
NEK1Q96PY6 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC18.09■□□□□ 0.49
NEK1Q96PY6 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.09■□□□□ 0.49
NEK1Q96PY6 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
NEK1Q96PY6 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC18.09■□□□□ 0.49
NEK1Q96PY6 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
NEK1Q96PY6 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NEK1Q96PY6 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NEK1Q96PY6 CICP14-201ENST00000629111 2732 ntBASIC18.09■□□□□ 0.49
NEK1Q96PY6 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NEK1Q96PY6 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.09■□□□□ 0.49
NEK1Q96PY6 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
NEK1Q96PY6 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NEK1Q96PY6 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC18.09■□□□□ 0.49
NEK1Q96PY6 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.09■□□□□ 0.49
NEK1Q96PY6 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NEK1Q96PY6 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC18.09■□□□□ 0.49
NEK1Q96PY6 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NEK1Q96PY6 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NEK1Q96PY6 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NEK1Q96PY6 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
NEK1Q96PY6 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NEK1Q96PY6 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NEK1Q96PY6 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC18.08■□□□□ 0.49
NEK1Q96PY6 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NEK1Q96PY6 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NEK1Q96PY6 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NEK1Q96PY6 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NEK1Q96PY6 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC18.08■□□□□ 0.49
NEK1Q96PY6 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC18.08■□□□□ 0.49
NEK1Q96PY6 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NEK1Q96PY6 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
NEK1Q96PY6 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.08■□□□□ 0.48
NEK1Q96PY6 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.08■□□□□ 0.48
NEK1Q96PY6 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.08■□□□□ 0.48
NEK1Q96PY6 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC18.08■□□□□ 0.48
NEK1Q96PY6 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC18.08■□□□□ 0.48
NEK1Q96PY6 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.08■□□□□ 0.48
NEK1Q96PY6 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.08■□□□□ 0.48
NEK1Q96PY6 CTBP2P3-201ENST00000585629 1255 ntBASIC18.08■□□□□ 0.48
NEK1Q96PY6 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
NEK1Q96PY6 AC008494.3-201ENST00000606615 944 ntBASIC18.08■□□□□ 0.48
NEK1Q96PY6 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.08■□□□□ 0.48
NEK1Q96PY6 PRSS30P-206ENST00000641773 873 ntBASIC18.08■□□□□ 0.48
NEK1Q96PY6 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC18.08■□□□□ 0.48
NEK1Q96PY6 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NEK1Q96PY6 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NEK1Q96PY6 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
NEK1Q96PY6 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NEK1Q96PY6 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NEK1Q96PY6 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NEK1Q96PY6 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NEK1Q96PY6 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
NEK1Q96PY6 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
NEK1Q96PY6 AC099063.4-201ENST00000641099 1602 ntBASIC18.08■□□□□ 0.48
NEK1Q96PY6 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NEK1Q96PY6 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NEK1Q96PY6 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.08■□□□□ 0.48
NEK1Q96PY6 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC18.08■□□□□ 0.48
NEK1Q96PY6 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
NEK1Q96PY6 SF1-209ENST00000433274 2317 ntTSL 2 BASIC18.07■□□□□ 0.48
NEK1Q96PY6 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
NEK1Q96PY6 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.07■□□□□ 0.48
NEK1Q96PY6 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NEK1Q96PY6 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC18.07■□□□□ 0.48
NEK1Q96PY6 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NEK1Q96PY6 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC18.07■□□□□ 0.48
NEK1Q96PY6 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NEK1Q96PY6 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
NEK1Q96PY6 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
NEK1Q96PY6 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NEK1Q96PY6 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
NEK1Q96PY6 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC18.07■□□□□ 0.48
NEK1Q96PY6 NUS1P3-201ENST00000423502 862 ntBASIC18.07■□□□□ 0.48
NEK1Q96PY6 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.07■□□□□ 0.48
NEK1Q96PY6 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.07■□□□□ 0.48
NEK1Q96PY6 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.07■□□□□ 0.48
NEK1Q96PY6 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.07■□□□□ 0.48
NEK1Q96PY6 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.07■□□□□ 0.48
NEK1Q96PY6 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms