Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
FGD4Q96M96 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FGD4Q96M96 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.23■□□□□ 0.35
FGD4Q96M96 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.23■□□□□ 0.35
FGD4Q96M96 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FGD4Q96M96 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FGD4Q96M96 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.23■□□□□ 0.35
FGD4Q96M96 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.23■□□□□ 0.35
FGD4Q96M96 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
FGD4Q96M96 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC17.23■□□□□ 0.35
FGD4Q96M96 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
FGD4Q96M96 RPL5P21-201ENST00000404620 815 ntBASIC17.23■□□□□ 0.35
FGD4Q96M96 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.23■□□□□ 0.35
FGD4Q96M96 AL354877.1-201ENST00000424412 413 ntBASIC17.23■□□□□ 0.35
FGD4Q96M96 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
FGD4Q96M96 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.23■□□□□ 0.35
FGD4Q96M96 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.23■□□□□ 0.35
FGD4Q96M96 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
FGD4Q96M96 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.23■□□□□ 0.35
FGD4Q96M96 AC106872.11-201ENST00000605838 421 ntBASIC17.23■□□□□ 0.35
FGD4Q96M96 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FGD4Q96M96 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
FGD4Q96M96 AC105250.1-201ENST00000509378 2057 ntBASIC17.23■□□□□ 0.35
FGD4Q96M96 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
FGD4Q96M96 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.23■□□□□ 0.35
FGD4Q96M96 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FGD4Q96M96 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FGD4Q96M96 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
FGD4Q96M96 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FGD4Q96M96 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
FGD4Q96M96 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FGD4Q96M96 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FGD4Q96M96 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
FGD4Q96M96 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
FGD4Q96M96 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.22■□□□□ 0.35
FGD4Q96M96 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
FGD4Q96M96 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FGD4Q96M96 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.22■□□□□ 0.35
FGD4Q96M96 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FGD4Q96M96 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FGD4Q96M96 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
FGD4Q96M96 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.22■□□□□ 0.35
FGD4Q96M96 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FGD4Q96M96 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
FGD4Q96M96 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.22■□□□□ 0.35
FGD4Q96M96 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FGD4Q96M96 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
FGD4Q96M96 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
FGD4Q96M96 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.22■□□□□ 0.35
FGD4Q96M96 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FGD4Q96M96 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.22■□□□□ 0.35
FGD4Q96M96 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.22■□□□□ 0.35
FGD4Q96M96 AC007663.3-201ENST00000609632 465 ntBASIC17.22■□□□□ 0.35
FGD4Q96M96 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.22■□□□□ 0.35
FGD4Q96M96 AC022748.3-201ENST00000621828 275 ntBASIC17.22■□□□□ 0.35
FGD4Q96M96 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FGD4Q96M96 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FGD4Q96M96 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FGD4Q96M96 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FGD4Q96M96 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.22■□□□□ 0.35
FGD4Q96M96 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.22■□□□□ 0.35
FGD4Q96M96 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FGD4Q96M96 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.22■□□□□ 0.35
FGD4Q96M96 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FGD4Q96M96 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FGD4Q96M96 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
FGD4Q96M96 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FGD4Q96M96 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.21■□□□□ 0.35
FGD4Q96M96 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.21■□□□□ 0.35
FGD4Q96M96 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FGD4Q96M96 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FGD4Q96M96 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
FGD4Q96M96 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FGD4Q96M96 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
FGD4Q96M96 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FGD4Q96M96 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
FGD4Q96M96 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FGD4Q96M96 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FGD4Q96M96 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FGD4Q96M96 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
FGD4Q96M96 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.21■□□□□ 0.35
FGD4Q96M96 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FGD4Q96M96 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.21■□□□□ 0.35
FGD4Q96M96 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.21■□□□□ 0.35
FGD4Q96M96 SERPINA13P-202ENST00000478994 924 ntBASIC17.21■□□□□ 0.35
FGD4Q96M96 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FGD4Q96M96 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
FGD4Q96M96 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC17.21■□□□□ 0.35
FGD4Q96M96 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.21■□□□□ 0.35
FGD4Q96M96 MIR3619-201ENST00000579667 83 ntBASIC17.21■□□□□ 0.35
FGD4Q96M96 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.21■□□□□ 0.35
FGD4Q96M96 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.21■□□□□ 0.35
FGD4Q96M96 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.21■□□□□ 0.35
FGD4Q96M96 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.21■□□□□ 0.35
FGD4Q96M96 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
FGD4Q96M96 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FGD4Q96M96 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FGD4Q96M96 FLJ16779-201ENST00000612722 7638 ntBASIC17.21■□□□□ 0.35
FGD4Q96M96 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.21■□□□□ 0.35
FGD4Q96M96 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms