Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
NBPF4Q96M43 AC007274.2-201ENST00000421675 662 ntBASIC19.86■□□□□ 0.77
NBPF4Q96M43 AL596276.2-201ENST00000447525 331 ntBASIC19.86■□□□□ 0.77
NBPF4Q96M43 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC19.86■□□□□ 0.77
NBPF4Q96M43 MIR5572-201ENST00000583188 137 ntBASIC19.86■□□□□ 0.77
NBPF4Q96M43 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC19.86■□□□□ 0.77
NBPF4Q96M43 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC19.86■□□□□ 0.77
NBPF4Q96M43 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NBPF4Q96M43 CDK7-214ENST00000626796 358 ntTSL 5 BASIC19.86■□□□□ 0.77
NBPF4Q96M43 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC19.86■□□□□ 0.77
NBPF4Q96M43 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
NBPF4Q96M43 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC19.86■□□□□ 0.77
NBPF4Q96M43 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC19.86■□□□□ 0.77
NBPF4Q96M43 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC19.86■□□□□ 0.77
NBPF4Q96M43 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NBPF4Q96M43 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC19.86■□□□□ 0.77
NBPF4Q96M43 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
NBPF4Q96M43 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NBPF4Q96M43 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NBPF4Q96M43 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NBPF4Q96M43 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC19.86■□□□□ 0.77
NBPF4Q96M43 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NBPF4Q96M43 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NBPF4Q96M43 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.86■□□□□ 0.77
NBPF4Q96M43 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
NBPF4Q96M43 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.85■□□□□ 0.77
NBPF4Q96M43 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC19.85■□□□□ 0.77
NBPF4Q96M43 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NBPF4Q96M43 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.85■□□□□ 0.77
NBPF4Q96M43 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NBPF4Q96M43 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NBPF4Q96M43 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC19.85■□□□□ 0.77
NBPF4Q96M43 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
NBPF4Q96M43 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NBPF4Q96M43 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NBPF4Q96M43 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC19.85■□□□□ 0.77
NBPF4Q96M43 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
NBPF4Q96M43 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
NBPF4Q96M43 MBLAC2-202ENST00000514906 1936 ntBASIC19.85■□□□□ 0.77
NBPF4Q96M43 AMT-239ENST00000636865 1914 ntTSL 5 BASIC19.85■□□□□ 0.77
NBPF4Q96M43 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NBPF4Q96M43 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NBPF4Q96M43 PDIA3P2-201ENST00000428073 158 ntBASIC19.85■□□□□ 0.77
NBPF4Q96M43 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
NBPF4Q96M43 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC19.85■□□□□ 0.77
NBPF4Q96M43 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC19.85■□□□□ 0.77
NBPF4Q96M43 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC19.85■□□□□ 0.77
NBPF4Q96M43 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC19.85■□□□□ 0.77
NBPF4Q96M43 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
NBPF4Q96M43 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NBPF4Q96M43 AL132994.2-201ENST00000603120 687 ntBASIC19.85■□□□□ 0.77
NBPF4Q96M43 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC19.85■□□□□ 0.77
NBPF4Q96M43 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC19.85■□□□□ 0.77
NBPF4Q96M43 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NBPF4Q96M43 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NBPF4Q96M43 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
NBPF4Q96M43 STRN-202ENST00000379213 2254 ntTSL 5 BASIC19.85■□□□□ 0.77
NBPF4Q96M43 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NBPF4Q96M43 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NBPF4Q96M43 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NBPF4Q96M43 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NBPF4Q96M43 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NBPF4Q96M43 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
NBPF4Q96M43 RBM38-204ENST00000371219 760 ntTSL 2 BASIC19.84■□□□□ 0.77
NBPF4Q96M43 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NBPF4Q96M43 ISCA2P1-201ENST00000425548 448 ntBASIC19.84■□□□□ 0.77
NBPF4Q96M43 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NBPF4Q96M43 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC19.84■□□□□ 0.77
NBPF4Q96M43 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC19.84■□□□□ 0.77
NBPF4Q96M43 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC19.84■□□□□ 0.77
NBPF4Q96M43 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC19.84■□□□□ 0.77
NBPF4Q96M43 AC009779.1-201ENST00000551138 283 ntBASIC19.84■□□□□ 0.77
NBPF4Q96M43 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC19.84■□□□□ 0.77
NBPF4Q96M43 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC19.84■□□□□ 0.77
NBPF4Q96M43 AC020922.3-201ENST00000595064 547 ntBASIC19.84■□□□□ 0.77
NBPF4Q96M43 AP000346.4-201ENST00000614827 381 ntBASIC19.84■□□□□ 0.77
NBPF4Q96M43 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC19.84■□□□□ 0.77
NBPF4Q96M43 Z98259.2-201ENST00000641583 609 ntBASIC19.84■□□□□ 0.77
NBPF4Q96M43 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
NBPF4Q96M43 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
NBPF4Q96M43 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NBPF4Q96M43 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NBPF4Q96M43 AC003102.2-201ENST00000589195 1469 ntBASIC19.84■□□□□ 0.77
NBPF4Q96M43 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.84■□□□□ 0.77
NBPF4Q96M43 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.84■□□□□ 0.77
NBPF4Q96M43 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NBPF4Q96M43 AC006058.4-201ENST00000624016 1670 ntBASIC19.84■□□□□ 0.77
NBPF4Q96M43 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NBPF4Q96M43 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NBPF4Q96M43 AMT-204ENST00000427987 1646 ntTSL 5 BASIC19.84■□□□□ 0.77
NBPF4Q96M43 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NBPF4Q96M43 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NBPF4Q96M43 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
NBPF4Q96M43 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
NBPF4Q96M43 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NBPF4Q96M43 FAM90A7P-201ENST00000382628 1395 ntBASIC19.83■□□□□ 0.77
NBPF4Q96M43 FAM90A23P-201ENST00000400136 1395 ntBASIC19.83■□□□□ 0.77
NBPF4Q96M43 LILRP1-201ENST00000444199 1370 ntBASIC19.83■□□□□ 0.77
NBPF4Q96M43 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NBPF4Q96M43 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms