Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.79□□□□□ -0.2
PTP4A1Q93096 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PTP4A1Q93096 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.78□□□□□ -0.2
PTP4A1Q93096 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.78□□□□□ -0.2
PTP4A1Q93096 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
PTP4A1Q93096 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.78□□□□□ -0.2
PTP4A1Q93096 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PTP4A1Q93096 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTP4A1Q93096 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTP4A1Q93096 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTP4A1Q93096 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PTP4A1Q93096 AC041040.2-201ENST00000622926 2899 ntBASIC13.78□□□□□ -0.2
PTP4A1Q93096 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.78□□□□□ -0.2
PTP4A1Q93096 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
PTP4A1Q93096 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTP4A1Q93096 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTP4A1Q93096 AP001267.2-201ENST00000532619 2086 ntBASIC13.78□□□□□ -0.2
PTP4A1Q93096 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTP4A1Q93096 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTP4A1Q93096 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.78□□□□□ -0.2
PTP4A1Q93096 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PTP4A1Q93096 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTP4A1Q93096 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTP4A1Q93096 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTP4A1Q93096 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.78□□□□□ -0.2
PTP4A1Q93096 AC027601.5-201ENST00000624065 2482 ntBASIC13.78□□□□□ -0.2
PTP4A1Q93096 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PTP4A1Q93096 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
PTP4A1Q93096 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTP4A1Q93096 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTP4A1Q93096 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PTP4A1Q93096 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
PTP4A1Q93096 RPL37AP1-201ENST00000412502 279 ntBASIC13.78□□□□□ -0.2
PTP4A1Q93096 AC015922.1-201ENST00000421102 1152 ntBASIC13.78□□□□□ -0.2
PTP4A1Q93096 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.78□□□□□ -0.2
PTP4A1Q93096 METTL21AP1-201ENST00000438852 635 ntBASIC13.78□□□□□ -0.2
PTP4A1Q93096 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.78□□□□□ -0.2
PTP4A1Q93096 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTP4A1Q93096 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.78□□□□□ -0.2
PTP4A1Q93096 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.78□□□□□ -0.2
PTP4A1Q93096 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.78□□□□□ -0.2
PTP4A1Q93096 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PTP4A1Q93096 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTP4A1Q93096 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.78□□□□□ -0.2
PTP4A1Q93096 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.78□□□□□ -0.2
PTP4A1Q93096 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.78□□□□□ -0.2
PTP4A1Q93096 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTP4A1Q93096 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTP4A1Q93096 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTP4A1Q93096 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PTP4A1Q93096 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.78□□□□□ -0.2
PTP4A1Q93096 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PTP4A1Q93096 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTP4A1Q93096 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTP4A1Q93096 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTP4A1Q93096 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTP4A1Q93096 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.78□□□□□ -0.2
PTP4A1Q93096 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.78□□□□□ -0.2
PTP4A1Q93096 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.78□□□□□ -0.2
PTP4A1Q93096 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTP4A1Q93096 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PTP4A1Q93096 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.78□□□□□ -0.2
PTP4A1Q93096 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PTP4A1Q93096 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.78□□□□□ -0.2
PTP4A1Q93096 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PTP4A1Q93096 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
PTP4A1Q93096 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.78□□□□□ -0.2
PTP4A1Q93096 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
PTP4A1Q93096 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
PTP4A1Q93096 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
PTP4A1Q93096 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PTP4A1Q93096 LINC01230-201ENST00000625222 3017 ntBASIC13.77□□□□□ -0.2
PTP4A1Q93096 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
PTP4A1Q93096 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
PTP4A1Q93096 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
PTP4A1Q93096 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
PTP4A1Q93096 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
PTP4A1Q93096 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTP4A1Q93096 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTP4A1Q93096 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
PTP4A1Q93096 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTP4A1Q93096 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTP4A1Q93096 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.77□□□□□ -0.21
PTP4A1Q93096 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PTP4A1Q93096 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.77□□□□□ -0.21
PTP4A1Q93096 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.77□□□□□ -0.21
PTP4A1Q93096 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTP4A1Q93096 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTP4A1Q93096 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PTP4A1Q93096 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.77□□□□□ -0.21
PTP4A1Q93096 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PTP4A1Q93096 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
PTP4A1Q93096 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.77□□□□□ -0.21
PTP4A1Q93096 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTP4A1Q93096 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PTP4A1Q93096 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTP4A1Q93096 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PTP4A1Q93096 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
PTP4A1Q93096 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PTP4A1Q93096 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms