Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 LILRP1-201ENST00000444199 1370 ntBASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 CICP14-201ENST00000629111 2732 ntBASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHROOM3Q8TF72 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SHROOM3Q8TF72 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
SHROOM3Q8TF72 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
SHROOM3Q8TF72 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
SHROOM3Q8TF72 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SHROOM3Q8TF72 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SHROOM3Q8TF72 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
SHROOM3Q8TF72 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.52■□□□□ 0.08
SHROOM3Q8TF72 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SHROOM3Q8TF72 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SHROOM3Q8TF72 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SHROOM3Q8TF72 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.52■□□□□ 0.08
SHROOM3Q8TF72 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
SHROOM3Q8TF72 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SHROOM3Q8TF72 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.52■□□□□ 0.08
SHROOM3Q8TF72 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
SHROOM3Q8TF72 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SHROOM3Q8TF72 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SHROOM3Q8TF72 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SHROOM3Q8TF72 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
SHROOM3Q8TF72 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.52■□□□□ 0.07
SHROOM3Q8TF72 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SHROOM3Q8TF72 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.52■□□□□ 0.07
SHROOM3Q8TF72 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.52■□□□□ 0.07
SHROOM3Q8TF72 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.52■□□□□ 0.07
SHROOM3Q8TF72 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.52■□□□□ 0.07
SHROOM3Q8TF72 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
SHROOM3Q8TF72 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.52■□□□□ 0.07
SHROOM3Q8TF72 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.52■□□□□ 0.07
SHROOM3Q8TF72 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SHROOM3Q8TF72 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
SHROOM3Q8TF72 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SHROOM3Q8TF72 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SHROOM3Q8TF72 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SHROOM3Q8TF72 LINC01101-201ENST00000622953 1884 ntBASIC15.52■□□□□ 0.07
SHROOM3Q8TF72 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SHROOM3Q8TF72 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
SHROOM3Q8TF72 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SHROOM3Q8TF72 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.52■□□□□ 0.07
SHROOM3Q8TF72 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.52■□□□□ 0.07
SHROOM3Q8TF72 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
SHROOM3Q8TF72 CROCCP1-201ENST00000426910 5675 ntBASIC15.52■□□□□ 0.07
SHROOM3Q8TF72 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SHROOM3Q8TF72 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SHROOM3Q8TF72 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
SHROOM3Q8TF72 AC018529.2-202ENST00000611482 3087 ntBASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms