Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 MIR566-201ENST00000385187 94 ntBASIC9.96□□□□□ -0.81
ALMS1Q8TCU4 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
ALMS1Q8TCU4 SERBP1P2-201ENST00000436888 1164 ntBASIC9.96□□□□□ -0.81
ALMS1Q8TCU4 HNRNPA1P42-201ENST00000458678 957 ntBASIC9.96□□□□□ -0.81
ALMS1Q8TCU4 RBM4-207ENST00000506523 654 ntTSL 3 BASIC9.96□□□□□ -0.81
ALMS1Q8TCU4 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC9.96□□□□□ -0.81
ALMS1Q8TCU4 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC9.96□□□□□ -0.81
ALMS1Q8TCU4 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC9.96□□□□□ -0.81
ALMS1Q8TCU4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
ALMS1Q8TCU4 FAS-202ENST00000352159 1722 ntTSL 5 BASIC9.96□□□□□ -0.81
ALMS1Q8TCU4 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC9.96□□□□□ -0.81
ALMS1Q8TCU4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
ALMS1Q8TCU4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC9.96□□□□□ -0.82
ALMS1Q8TCU4 LINC02199-201ENST00000506655 2702 ntBASIC9.96□□□□□ -0.82
ALMS1Q8TCU4 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
ALMS1Q8TCU4 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
ALMS1Q8TCU4 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
ALMS1Q8TCU4 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
ALMS1Q8TCU4 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC9.96□□□□□ -0.82
ALMS1Q8TCU4 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC9.96□□□□□ -0.82
ALMS1Q8TCU4 AC021016.3-201ENST00000608367 477 ntBASIC9.96□□□□□ -0.82
ALMS1Q8TCU4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC9.96□□□□□ -0.82
ALMS1Q8TCU4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
ALMS1Q8TCU4 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
ALMS1Q8TCU4 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
ALMS1Q8TCU4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
ALMS1Q8TCU4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
ALMS1Q8TCU4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
ALMS1Q8TCU4 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
ALMS1Q8TCU4 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
ALMS1Q8TCU4 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
ALMS1Q8TCU4 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
ALMS1Q8TCU4 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
ALMS1Q8TCU4 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
ALMS1Q8TCU4 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC9.96□□□□□ -0.82
ALMS1Q8TCU4 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC9.96□□□□□ -0.82
ALMS1Q8TCU4 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC9.96□□□□□ -0.82
ALMS1Q8TCU4 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC9.96□□□□□ -0.82
ALMS1Q8TCU4 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 PTPA-215ENST00000432124 567 ntTSL 4 BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 ACTG1P19-201ENST00000418987 1116 ntBASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 ZBED1P1-201ENST00000502364 1930 ntBASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 TLE1P1-201ENST00000422965 589 ntBASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 RPS23-204ENST00000507980 836 ntTSL 2 BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 FOXN3-AS2-201ENST00000554071 1262 ntBASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
ALMS1Q8TCU4 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms