Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 AZGP1P1-201ENST00000411909 902 ntBASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 PDPK2P-202ENST00000562415 1191 ntBASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 MTHFR-210ENST00000641407 2387 ntBASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 AC106730.1-201ENST00000566722 1090 ntBASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 AL645728.2-202ENST00000641679 227 ntBASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 AC012508.2-201ENST00000567613 1472 ntBASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 FP325330.2-201ENST00000624219 5630 ntBASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 AC027601.5-201ENST00000624065 2482 ntBASIC15.32■□□□□ 0.04
RAB3IL1Q8TBN0 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RAB3IL1Q8TBN0 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC15.31■□□□□ 0.04
RAB3IL1Q8TBN0 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB3IL1Q8TBN0 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB3IL1Q8TBN0 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB3IL1Q8TBN0 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB3IL1Q8TBN0 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RAB3IL1Q8TBN0 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB3IL1Q8TBN0 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB3IL1Q8TBN0 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.31■□□□□ 0.04
RAB3IL1Q8TBN0 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.31■□□□□ 0.04
RAB3IL1Q8TBN0 MIR346-201ENST00000362234 95 ntBASIC15.31■□□□□ 0.04
RAB3IL1Q8TBN0 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms