Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.19■□□□□ 0.02
RFWD2Q8NHY2 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.19■□□□□ 0.02
RFWD2Q8NHY2 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.19■□□□□ 0.02
RFWD2Q8NHY2 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.19■□□□□ 0.02
RFWD2Q8NHY2 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFWD2Q8NHY2 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFWD2Q8NHY2 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFWD2Q8NHY2 AL513190.1-201ENST00000621254 727 ntBASIC15.19■□□□□ 0.02
RFWD2Q8NHY2 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.19■□□□□ 0.02
RFWD2Q8NHY2 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RFWD2Q8NHY2 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RFWD2Q8NHY2 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFWD2Q8NHY2 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.19■□□□□ 0.02
RFWD2Q8NHY2 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.19■□□□□ 0.02
RFWD2Q8NHY2 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RFWD2Q8NHY2 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RFWD2Q8NHY2 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFWD2Q8NHY2 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.19■□□□□ 0.02
RFWD2Q8NHY2 CICP20-201ENST00000443330 2801 ntBASIC15.19■□□□□ 0.02
RFWD2Q8NHY2 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFWD2Q8NHY2 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFWD2Q8NHY2 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
RFWD2Q8NHY2 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFWD2Q8NHY2 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RFWD2Q8NHY2 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 MST1P2-201ENST00000457982 2291 ntBASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 AC142381.1-201ENST00000426099 345 ntBASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 POLD2P1-201ENST00000511220 997 ntBASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 AC092865.6-201ENST00000642101 219 ntBASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RFWD2Q8NHY2 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RFWD2Q8NHY2 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFWD2Q8NHY2 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
RFWD2Q8NHY2 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RFWD2Q8NHY2 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RFWD2Q8NHY2 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.17■□□□□ 0.02
RFWD2Q8NHY2 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.17■□□□□ 0.02
RFWD2Q8NHY2 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFWD2Q8NHY2 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFWD2Q8NHY2 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RFWD2Q8NHY2 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC15.17■□□□□ 0.02
RFWD2Q8NHY2 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RFWD2Q8NHY2 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RFWD2Q8NHY2 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFWD2Q8NHY2 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RFWD2Q8NHY2 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFWD2Q8NHY2 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RFWD2Q8NHY2 AC138969.3-201ENST00000546612 1459 ntBASIC15.17■□□□□ 0.02
RFWD2Q8NHY2 AC138932.2-201ENST00000548268 1459 ntBASIC15.17■□□□□ 0.02
RFWD2Q8NHY2 AC126755.4-201ENST00000549796 1459 ntBASIC15.17■□□□□ 0.02
RFWD2Q8NHY2 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFWD2Q8NHY2 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.17■□□□□ 0.02
RFWD2Q8NHY2 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFWD2Q8NHY2 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFWD2Q8NHY2 FAM220BP-201ENST00000377689 816 ntBASIC15.17■□□□□ 0.02
RFWD2Q8NHY2 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFWD2Q8NHY2 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFWD2Q8NHY2 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.17■□□□□ 0.02
RFWD2Q8NHY2 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RFWD2Q8NHY2 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RFWD2Q8NHY2 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.17■□□□□ 0.02
RFWD2Q8NHY2 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RFWD2Q8NHY2 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.17■□□□□ 0.02
RFWD2Q8NHY2 AC099522.2-201ENST00000607001 744 ntBASIC15.17■□□□□ 0.02
RFWD2Q8NHY2 FAM197Y3-203ENST00000618346 717 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms