Protein–RNA interactions for Protein: Q8NB49

ATP11C, Phospholipid-transporting ATPase IG, humanhuman

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP11CQ8NB49 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATP11CQ8NB49 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
ATP11CQ8NB49 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 FGD5P1-202ENST00000614866 2498 ntBASIC16.01■□□□□ 0.15
ATP11CQ8NB49 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 RN7SL399P-201ENST00000471648 279 ntBASIC16.01■□□□□ 0.15
ATP11CQ8NB49 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.01■□□□□ 0.15
ATP11CQ8NB49 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATP11CQ8NB49 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATP11CQ8NB49 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATP11CQ8NB49 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATP11CQ8NB49 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATP11CQ8NB49 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATP11CQ8NB49 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
ATP11CQ8NB49 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16■□□□□ 0.15
ATP11CQ8NB49 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16■□□□□ 0.15
ATP11CQ8NB49 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
ATP11CQ8NB49 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
ATP11CQ8NB49 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATP11CQ8NB49 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16■□□□□ 0.15
ATP11CQ8NB49 CLK3P2-201ENST00000427566 1453 ntBASIC16■□□□□ 0.15
ATP11CQ8NB49 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
ATP11CQ8NB49 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16■□□□□ 0.15
ATP11CQ8NB49 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16■□□□□ 0.15
ATP11CQ8NB49 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16■□□□□ 0.15
ATP11CQ8NB49 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16■□□□□ 0.15
ATP11CQ8NB49 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16■□□□□ 0.15
ATP11CQ8NB49 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16■□□□□ 0.15
ATP11CQ8NB49 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16■□□□□ 0.15
ATP11CQ8NB49 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16■□□□□ 0.15
ATP11CQ8NB49 WASH4P-201ENST00000564273 1246 ntBASIC16■□□□□ 0.15
ATP11CQ8NB49 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16■□□□□ 0.15
ATP11CQ8NB49 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16■□□□□ 0.15
ATP11CQ8NB49 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16■□□□□ 0.15
ATP11CQ8NB49 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16■□□□□ 0.15
ATP11CQ8NB49 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16■□□□□ 0.15
ATP11CQ8NB49 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16■□□□□ 0.15
ATP11CQ8NB49 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16■□□□□ 0.15
ATP11CQ8NB49 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16■□□□□ 0.15
ATP11CQ8NB49 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16■□□□□ 0.15
ATP11CQ8NB49 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16■□□□□ 0.15
ATP11CQ8NB49 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATP11CQ8NB49 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16■□□□□ 0.15
ATP11CQ8NB49 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16■□□□□ 0.15
ATP11CQ8NB49 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATP11CQ8NB49 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATP11CQ8NB49 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATP11CQ8NB49 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
ATP11CQ8NB49 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATP11CQ8NB49 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16■□□□□ 0.15
ATP11CQ8NB49 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC16■□□□□ 0.15
ATP11CQ8NB49 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
ATP11CQ8NB49 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
ATP11CQ8NB49 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ATP11CQ8NB49 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
ATP11CQ8NB49 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ATP11CQ8NB49 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms