Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC12.37□□□□□ -0.43
LINC00311Q8N616 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00311Q8N616 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00311Q8N616 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
LINC00311Q8N616 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00311Q8N616 AL137783.1-201ENST00000623494 1896 ntBASIC12.37□□□□□ -0.43
LINC00311Q8N616 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00311Q8N616 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00311Q8N616 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00311Q8N616 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00311Q8N616 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00311Q8N616 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
LINC00311Q8N616 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00311Q8N616 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00311Q8N616 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.37□□□□□ -0.43
LINC00311Q8N616 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
LINC00311Q8N616 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00311Q8N616 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.37□□□□□ -0.43
LINC00311Q8N616 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00311Q8N616 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00311Q8N616 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC00311Q8N616 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00311Q8N616 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
LINC00311Q8N616 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00311Q8N616 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
LINC00311Q8N616 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
LINC00311Q8N616 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00311Q8N616 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00311Q8N616 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
LINC00311Q8N616 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
LINC00311Q8N616 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00311Q8N616 CICP24-201ENST00000605464 2705 ntBASIC12.36□□□□□ -0.43
LINC00311Q8N616 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
LINC00311Q8N616 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
LINC00311Q8N616 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00311Q8N616 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00311Q8N616 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00311Q8N616 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00311Q8N616 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC00311Q8N616 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00311Q8N616 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00311Q8N616 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.36□□□□□ -0.43
LINC00311Q8N616 HMGN1P19-201ENST00000436976 333 ntBASIC12.36□□□□□ -0.43
LINC00311Q8N616 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC00311Q8N616 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC12.36□□□□□ -0.43
LINC00311Q8N616 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00311Q8N616 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
LINC00311Q8N616 AC092364.2-202ENST00000597012 1073 ntBASIC12.36□□□□□ -0.43
LINC00311Q8N616 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC12.36□□□□□ -0.43
LINC00311Q8N616 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00311Q8N616 AL033527.5-201ENST00000641382 801 ntBASIC12.36□□□□□ -0.43
LINC00311Q8N616 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00311Q8N616 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00311Q8N616 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00311Q8N616 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00311Q8N616 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00311Q8N616 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00311Q8N616 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00311Q8N616 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00311Q8N616 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
LINC00311Q8N616 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00311Q8N616 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00311Q8N616 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.35□□□□□ -0.43
LINC00311Q8N616 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00311Q8N616 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00311Q8N616 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00311Q8N616 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.35□□□□□ -0.43
LINC00311Q8N616 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC00311Q8N616 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
LINC00311Q8N616 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00311Q8N616 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC00311Q8N616 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00311Q8N616 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00311Q8N616 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC12.35□□□□□ -0.43
LINC00311Q8N616 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00311Q8N616 AC007292.2-201ENST00000593524 1812 ntBASIC12.35□□□□□ -0.43
LINC00311Q8N616 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC00311Q8N616 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00311Q8N616 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00311Q8N616 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC00311Q8N616 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00311Q8N616 AC018442.1-201ENST00000421439 2061 ntBASIC12.35□□□□□ -0.43
LINC00311Q8N616 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00311Q8N616 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00311Q8N616 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00311Q8N616 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00311Q8N616 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
LINC00311Q8N616 AC098614.1-201ENST00000368528 745 ntBASIC12.35□□□□□ -0.43
LINC00311Q8N616 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC00311Q8N616 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC12.35□□□□□ -0.43
LINC00311Q8N616 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
LINC00311Q8N616 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00311Q8N616 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00311Q8N616 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00311Q8N616 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
LINC00311Q8N616 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC00311Q8N616 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.35□□□□□ -0.43
LINC00311Q8N616 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00311Q8N616 WASH4P-201ENST00000564273 1246 ntBASIC12.35□□□□□ -0.43
LINC00311Q8N616 AC027307.3-201ENST00000594262 1100 ntBASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms