Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS3Q8IXF0 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
NPAS3Q8IXF0 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.72■□□□□ 0.11
NPAS3Q8IXF0 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.72■□□□□ 0.11
NPAS3Q8IXF0 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.72■□□□□ 0.11
NPAS3Q8IXF0 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS3Q8IXF0 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
NPAS3Q8IXF0 AC091046.1-201ENST00000331871 207 ntBASIC15.72■□□□□ 0.11
NPAS3Q8IXF0 DPM3-202ENST00000368399 517 ntBASIC15.72■□□□□ 0.11
NPAS3Q8IXF0 HINT2P1-201ENST00000419438 481 ntBASIC15.72■□□□□ 0.11
NPAS3Q8IXF0 AL008707.1-201ENST00000422498 534 ntBASIC15.72■□□□□ 0.11
NPAS3Q8IXF0 AC026434.2-201ENST00000506094 1078 ntBASIC15.72■□□□□ 0.11
NPAS3Q8IXF0 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC15.72■□□□□ 0.11
NPAS3Q8IXF0 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS3Q8IXF0 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.72■□□□□ 0.11
NPAS3Q8IXF0 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.72■□□□□ 0.11
NPAS3Q8IXF0 RN7SL774P-201ENST00000577467 290 ntBASIC15.72■□□□□ 0.11
NPAS3Q8IXF0 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
NPAS3Q8IXF0 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
NPAS3Q8IXF0 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
NPAS3Q8IXF0 AC091544.8-201ENST00000619490 361 ntBASIC15.72■□□□□ 0.11
NPAS3Q8IXF0 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS3Q8IXF0 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
NPAS3Q8IXF0 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS3Q8IXF0 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS3Q8IXF0 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.72■□□□□ 0.11
NPAS3Q8IXF0 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS3Q8IXF0 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
NPAS3Q8IXF0 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS3Q8IXF0 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS3Q8IXF0 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS3Q8IXF0 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS3Q8IXF0 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS3Q8IXF0 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS3Q8IXF0 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.71■□□□□ 0.11
NPAS3Q8IXF0 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
NPAS3Q8IXF0 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS3Q8IXF0 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS3Q8IXF0 AC010491.1-201ENST00000563101 2797 ntBASIC15.71■□□□□ 0.11
NPAS3Q8IXF0 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS3Q8IXF0 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.71■□□□□ 0.11
NPAS3Q8IXF0 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS3Q8IXF0 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.71■□□□□ 0.11
NPAS3Q8IXF0 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS3Q8IXF0 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS3Q8IXF0 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS3Q8IXF0 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS3Q8IXF0 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.71■□□□□ 0.11
NPAS3Q8IXF0 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS3Q8IXF0 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS3Q8IXF0 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS3Q8IXF0 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS3Q8IXF0 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC15.71■□□□□ 0.11
NPAS3Q8IXF0 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.71■□□□□ 0.11
NPAS3Q8IXF0 RNMTL1P1-201ENST00000454103 560 ntBASIC15.71■□□□□ 0.11
NPAS3Q8IXF0 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.71■□□□□ 0.11
NPAS3Q8IXF0 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.71■□□□□ 0.11
NPAS3Q8IXF0 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.71■□□□□ 0.11
NPAS3Q8IXF0 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.71■□□□□ 0.11
NPAS3Q8IXF0 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS3Q8IXF0 AC013355.1-201ENST00000562625 723 ntBASIC15.71■□□□□ 0.11
NPAS3Q8IXF0 MIR4683-201ENST00000579659 81 ntBASIC15.71■□□□□ 0.11
NPAS3Q8IXF0 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS3Q8IXF0 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
NPAS3Q8IXF0 AC009090.5-201ENST00000624886 2285 ntBASIC15.71■□□□□ 0.11
NPAS3Q8IXF0 AL162727.3-201ENST00000635661 2787 ntBASIC15.71■□□□□ 0.11
NPAS3Q8IXF0 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.71■□□□□ 0.11
NPAS3Q8IXF0 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.71■□□□□ 0.11
NPAS3Q8IXF0 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
NPAS3Q8IXF0 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
NPAS3Q8IXF0 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
NPAS3Q8IXF0 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NPAS3Q8IXF0 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.71■□□□□ 0.1
NPAS3Q8IXF0 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NPAS3Q8IXF0 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NPAS3Q8IXF0 FKBP4P6-201ENST00000457486 1332 ntBASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 AP000593.2-201ENST00000542775 1433 ntBASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS3Q8IXF0 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms