Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL23A1Q86Y22 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
COL23A1Q86Y22 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL23A1Q86Y22 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
COL23A1Q86Y22 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL23A1Q86Y22 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL23A1Q86Y22 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL23A1Q86Y22 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC18.8■□□□□ 0.6
COL23A1Q86Y22 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL23A1Q86Y22 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC18.8■□□□□ 0.6
COL23A1Q86Y22 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL23A1Q86Y22 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC18.8■□□□□ 0.6
COL23A1Q86Y22 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL23A1Q86Y22 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC18.8■□□□□ 0.6
COL23A1Q86Y22 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC18.8■□□□□ 0.6
COL23A1Q86Y22 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC18.8■□□□□ 0.6
COL23A1Q86Y22 AC024293.1-201ENST00000467930 498 ntBASIC18.8■□□□□ 0.6
COL23A1Q86Y22 LINC00634-202ENST00000505157 222 ntBASIC18.8■□□□□ 0.6
COL23A1Q86Y22 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC18.8■□□□□ 0.6
COL23A1Q86Y22 AC084752.1-201ENST00000509766 622 ntBASIC18.8■□□□□ 0.6
COL23A1Q86Y22 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC18.8■□□□□ 0.6
COL23A1Q86Y22 AP000911.2-201ENST00000534330 502 ntBASIC18.8■□□□□ 0.6
COL23A1Q86Y22 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
COL23A1Q86Y22 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
COL23A1Q86Y22 CR383656.3-201ENST00000551315 183 ntBASIC18.8■□□□□ 0.6
COL23A1Q86Y22 NUDT4P2-201ENST00000578341 546 ntBASIC18.8■□□□□ 0.6
COL23A1Q86Y22 RPS15-202ENST00000585665 467 ntTSL 3 BASIC18.8■□□□□ 0.6
COL23A1Q86Y22 EIF5AP2-201ENST00000585668 1047 ntBASIC18.8■□□□□ 0.6
COL23A1Q86Y22 AC011247.3-201ENST00000603297 438 ntBASIC18.8■□□□□ 0.6
COL23A1Q86Y22 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC18.8■□□□□ 0.6
COL23A1Q86Y22 AC027601.3-201ENST00000622907 509 ntBASIC18.8■□□□□ 0.6
COL23A1Q86Y22 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
COL23A1Q86Y22 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL23A1Q86Y22 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL23A1Q86Y22 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL23A1Q86Y22 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL23A1Q86Y22 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL23A1Q86Y22 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL23A1Q86Y22 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL23A1Q86Y22 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.8■□□□□ 0.6
COL23A1Q86Y22 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL23A1Q86Y22 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC18.8■□□□□ 0.6
COL23A1Q86Y22 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
COL23A1Q86Y22 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 NHP2-202ENST00000314397 599 ntTSL 2 BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 PSMD4P1-201ENST00000433951 1109 ntBASIC18.79■□□□□ 0.6
COL23A1Q86Y22 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 MIR3188-201ENST00000583494 85 ntBASIC18.79■□□□□ 0.6
COL23A1Q86Y22 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 DGAT2L7P-201ENST00000602462 744 ntBASIC18.79■□□□□ 0.6
COL23A1Q86Y22 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 AC080080.1-201ENST00000625121 2420 ntBASIC18.79■□□□□ 0.6
COL23A1Q86Y22 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.79■□□□□ 0.6
COL23A1Q86Y22 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL23A1Q86Y22 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL23A1Q86Y22 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.78■□□□□ 0.6
COL23A1Q86Y22 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL23A1Q86Y22 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC18.78■□□□□ 0.6
COL23A1Q86Y22 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL23A1Q86Y22 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
COL23A1Q86Y22 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL23A1Q86Y22 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL23A1Q86Y22 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL23A1Q86Y22 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms