Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PACS2Q86VP3 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PACS2Q86VP3 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PACS2Q86VP3 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.54■□□□□ 0.08
PACS2Q86VP3 GPAA1P2-202ENST00000606848 1787 ntBASIC15.54■□□□□ 0.08
PACS2Q86VP3 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PACS2Q86VP3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PACS2Q86VP3 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PACS2Q86VP3 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC15.54■□□□□ 0.08
PACS2Q86VP3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PACS2Q86VP3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PACS2Q86VP3 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
PACS2Q86VP3 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PACS2Q86VP3 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PACS2Q86VP3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PACS2Q86VP3 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PACS2Q86VP3 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PACS2Q86VP3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.53■□□□□ 0.08
PACS2Q86VP3 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
PACS2Q86VP3 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC15.53■□□□□ 0.08
PACS2Q86VP3 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PACS2Q86VP3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.53■□□□□ 0.08
PACS2Q86VP3 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PACS2Q86VP3 TSN-212ENST00000536142 3328 ntTSL 2 BASIC15.53■□□□□ 0.08
PACS2Q86VP3 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PACS2Q86VP3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PACS2Q86VP3 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.53■□□□□ 0.08
PACS2Q86VP3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.53■□□□□ 0.08
PACS2Q86VP3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PACS2Q86VP3 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.53■□□□□ 0.08
PACS2Q86VP3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PACS2Q86VP3 FAM8A3P-201ENST00000427218 844 ntBASIC15.53■□□□□ 0.08
PACS2Q86VP3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.53■□□□□ 0.08
PACS2Q86VP3 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.53■□□□□ 0.08
PACS2Q86VP3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.53■□□□□ 0.08
PACS2Q86VP3 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PACS2Q86VP3 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
PACS2Q86VP3 KRT18P2-201ENST00000447938 1258 ntBASIC15.53■□□□□ 0.08
PACS2Q86VP3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.53■□□□□ 0.08
PACS2Q86VP3 SLC25A6P2-201ENST00000497974 877 ntBASIC15.53■□□□□ 0.08
PACS2Q86VP3 PGAM5P1-201ENST00000518923 814 ntBASIC15.53■□□□□ 0.08
PACS2Q86VP3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.53■□□□□ 0.08
PACS2Q86VP3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.53■□□□□ 0.08
PACS2Q86VP3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.53■□□□□ 0.08
PACS2Q86VP3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
PACS2Q86VP3 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.53■□□□□ 0.08
PACS2Q86VP3 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PACS2Q86VP3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.53■□□□□ 0.08
PACS2Q86VP3 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PACS2Q86VP3 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC15.53■□□□□ 0.08
PACS2Q86VP3 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PACS2Q86VP3 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC15.53■□□□□ 0.08
PACS2Q86VP3 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PACS2Q86VP3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PACS2Q86VP3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.53■□□□□ 0.08
PACS2Q86VP3 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
PACS2Q86VP3 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PACS2Q86VP3 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PACS2Q86VP3 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC15.53■□□□□ 0.08
PACS2Q86VP3 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
PACS2Q86VP3 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
PACS2Q86VP3 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC15.53■□□□□ 0.08
PACS2Q86VP3 AL592424.1-201ENST00000563624 1536 ntBASIC15.53■□□□□ 0.08
PACS2Q86VP3 TRIM80P-201ENST00000455685 2848 ntBASIC15.53■□□□□ 0.08
PACS2Q86VP3 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PACS2Q86VP3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PACS2Q86VP3 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PACS2Q86VP3 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.52■□□□□ 0.08
PACS2Q86VP3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PACS2Q86VP3 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
PACS2Q86VP3 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
PACS2Q86VP3 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PACS2Q86VP3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.52■□□□□ 0.08
PACS2Q86VP3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.52■□□□□ 0.08
PACS2Q86VP3 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
PACS2Q86VP3 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PACS2Q86VP3 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PACS2Q86VP3 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC15.52■□□□□ 0.08
PACS2Q86VP3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PACS2Q86VP3 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.52■□□□□ 0.08
PACS2Q86VP3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PACS2Q86VP3 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PACS2Q86VP3 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.52■□□□□ 0.08
PACS2Q86VP3 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PACS2Q86VP3 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PACS2Q86VP3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PACS2Q86VP3 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PACS2Q86VP3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PACS2Q86VP3 IGLL3P-201ENST00000412472 434 ntBASIC15.52■□□□□ 0.08
PACS2Q86VP3 BX842568.4-201ENST00000421222 227 ntBASIC15.52■□□□□ 0.08
PACS2Q86VP3 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC15.52■□□□□ 0.08
PACS2Q86VP3 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PACS2Q86VP3 FAM185BP-201ENST00000443595 716 ntBASIC15.52■□□□□ 0.08
PACS2Q86VP3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.52■□□□□ 0.08
PACS2Q86VP3 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC15.52■□□□□ 0.08
PACS2Q86VP3 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.52■□□□□ 0.08
PACS2Q86VP3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.52■□□□□ 0.08
PACS2Q86VP3 AC092865.5-201ENST00000545435 363 ntBASIC15.52■□□□□ 0.08
PACS2Q86VP3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PACS2Q86VP3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms