Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC005912.2-201ENST00000619492 2400 ntBASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 LINC01101-201ENST00000622953 1884 ntBASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 RN7SL399P-201ENST00000471648 279 ntBASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NHLRC1Q6VVB1 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 AC015656.1-201ENST00000624209 3578 ntBASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 SPDYE19P-201ENST00000338590 713 ntBASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 INGX-202ENST00000489074 768 ntBASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 AJ011932.1-201ENST00000621707 465 ntBASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 DRD5P1-201ENST00000456605 1438 ntBASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 ZBED1P1-201ENST00000502364 1930 ntBASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.78□□□□□ -0.2
NHLRC1Q6VVB1 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.77□□□□□ -0.2
NHLRC1Q6VVB1 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
NHLRC1Q6VVB1 AC117489.1-201ENST00000625169 3217 ntBASIC13.77□□□□□ -0.2
NHLRC1Q6VVB1 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.77□□□□□ -0.2
NHLRC1Q6VVB1 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.2
NHLRC1Q6VVB1 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
NHLRC1Q6VVB1 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
NHLRC1Q6VVB1 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
NHLRC1Q6VVB1 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms