Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.76□□□□□ -0.05
PPP4R4Q6NUP7 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.76□□□□□ -0.05
PPP4R4Q6NUP7 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.76□□□□□ -0.05
PPP4R4Q6NUP7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.76□□□□□ -0.05
PPP4R4Q6NUP7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.76□□□□□ -0.05
PPP4R4Q6NUP7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PPP4R4Q6NUP7 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.76□□□□□ -0.05
PPP4R4Q6NUP7 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PPP4R4Q6NUP7 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
PPP4R4Q6NUP7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.76□□□□□ -0.05
PPP4R4Q6NUP7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PPP4R4Q6NUP7 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PPP4R4Q6NUP7 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PPP4R4Q6NUP7 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
PPP4R4Q6NUP7 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PPP4R4Q6NUP7 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PPP4R4Q6NUP7 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PPP4R4Q6NUP7 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PPP4R4Q6NUP7 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PPP4R4Q6NUP7 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PPP4R4Q6NUP7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PPP4R4Q6NUP7 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
PPP4R4Q6NUP7 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PPP4R4Q6NUP7 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PPP4R4Q6NUP7 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.76□□□□□ -0.05
PPP4R4Q6NUP7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PPP4R4Q6NUP7 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.76□□□□□ -0.05
PPP4R4Q6NUP7 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 AC073439.1-201ENST00000624121 1774 ntBASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 AC018892.3-201ENST00000623986 2499 ntBASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 AC105233.2-201ENST00000523697 349 ntBASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 AF228730.5-201ENST00000530288 346 ntBASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 MIR6080-201ENST00000617359 66 ntBASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.75□□□□□ -0.05
PPP4R4Q6NUP7 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 FAM58DP-201ENST00000428076 619 ntBASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 FAM86GP-201ENST00000448322 971 ntBASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms