Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.77□□□□□ -0.37
ANKRD55Q3KP44 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC12.77□□□□□ -0.37
ANKRD55Q3KP44 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC12.77□□□□□ -0.37
ANKRD55Q3KP44 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC12.77□□□□□ -0.37
ANKRD55Q3KP44 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.77□□□□□ -0.37
ANKRD55Q3KP44 AC140113.2-201ENST00000604370 208 ntBASIC12.77□□□□□ -0.37
ANKRD55Q3KP44 AC064836.3-201ENST00000607928 673 ntBASIC12.77□□□□□ -0.37
ANKRD55Q3KP44 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ANKRD55Q3KP44 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC12.77□□□□□ -0.37
ANKRD55Q3KP44 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ANKRD55Q3KP44 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
ANKRD55Q3KP44 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ANKRD55Q3KP44 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ANKRD55Q3KP44 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.77□□□□□ -0.37
ANKRD55Q3KP44 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC12.77□□□□□ -0.37
ANKRD55Q3KP44 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ANKRD55Q3KP44 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
ANKRD55Q3KP44 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ANKRD55Q3KP44 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ANKRD55Q3KP44 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ANKRD55Q3KP44 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ANKRD55Q3KP44 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ANKRD55Q3KP44 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ANKRD55Q3KP44 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.77□□□□□ -0.37
ANKRD55Q3KP44 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ANKRD55Q3KP44 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.77□□□□□ -0.37
ANKRD55Q3KP44 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 AZGP1P1-201ENST00000411909 902 ntBASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 AL359183.1-201ENST00000623796 2132 ntBASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
ANKRD55Q3KP44 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ANKRD55Q3KP44 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
ANKRD55Q3KP44 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ANKRD55Q3KP44 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.75□□□□□ -0.37
ANKRD55Q3KP44 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
ANKRD55Q3KP44 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
ANKRD55Q3KP44 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ANKRD55Q3KP44 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ANKRD55Q3KP44 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ANKRD55Q3KP44 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ANKRD55Q3KP44 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.75□□□□□ -0.37
ANKRD55Q3KP44 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ANKRD55Q3KP44 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ANKRD55Q3KP44 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.75□□□□□ -0.37
ANKRD55Q3KP44 AC007967.2-201ENST00000432613 625 ntBASIC12.75□□□□□ -0.37
ANKRD55Q3KP44 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ANKRD55Q3KP44 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.75□□□□□ -0.37
ANKRD55Q3KP44 DNAJB3-201ENST00000446806 729 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms