Protein–RNA interactions for Protein: Q16394

EXT1, Exostosin-1, humanhuman

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1Q16394 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
EXT1Q16394 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
EXT1Q16394 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EXT1Q16394 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
EXT1Q16394 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
EXT1Q16394 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EXT1Q16394 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.08□□□□□ -0.16
EXT1Q16394 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
EXT1Q16394 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EXT1Q16394 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.08□□□□□ -0.16
EXT1Q16394 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
EXT1Q16394 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
EXT1Q16394 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EXT1Q16394 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EXT1Q16394 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
EXT1Q16394 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
EXT1Q16394 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.08□□□□□ -0.16
EXT1Q16394 FAM8A4P-201ENST00000435433 1213 ntBASIC14.08□□□□□ -0.16
EXT1Q16394 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
EXT1Q16394 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.08□□□□□ -0.16
EXT1Q16394 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.08□□□□□ -0.16
EXT1Q16394 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.08□□□□□ -0.16
EXT1Q16394 RN7SL560P-201ENST00000577943 264 ntBASIC14.08□□□□□ -0.16
EXT1Q16394 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.08□□□□□ -0.16
EXT1Q16394 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EXT1Q16394 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EXT1Q16394 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
EXT1Q16394 REXO1L6P-201ENST00000603433 1515 ntBASIC14.08□□□□□ -0.16
EXT1Q16394 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.08□□□□□ -0.16
EXT1Q16394 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
EXT1Q16394 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
EXT1Q16394 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
EXT1Q16394 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EXT1Q16394 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EXT1Q16394 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EXT1Q16394 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EXT1Q16394 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.08□□□□□ -0.16
EXT1Q16394 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.08□□□□□ -0.16
EXT1Q16394 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
EXT1Q16394 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EXT1Q16394 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
EXT1Q16394 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
EXT1Q16394 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.07□□□□□ -0.16
EXT1Q16394 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.07□□□□□ -0.16
EXT1Q16394 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.07□□□□□ -0.16
EXT1Q16394 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EXT1Q16394 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
EXT1Q16394 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.07□□□□□ -0.16
EXT1Q16394 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
EXT1Q16394 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.07□□□□□ -0.16
EXT1Q16394 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.07□□□□□ -0.16
EXT1Q16394 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.07□□□□□ -0.16
EXT1Q16394 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
EXT1Q16394 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.07□□□□□ -0.16
EXT1Q16394 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.07□□□□□ -0.16
EXT1Q16394 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.07□□□□□ -0.16
EXT1Q16394 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
EXT1Q16394 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EXT1Q16394 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.07□□□□□ -0.16
EXT1Q16394 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.07□□□□□ -0.16
EXT1Q16394 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
EXT1Q16394 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
EXT1Q16394 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EXT1Q16394 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EXT1Q16394 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.07□□□□□ -0.16
EXT1Q16394 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.07□□□□□ -0.16
EXT1Q16394 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EXT1Q16394 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
EXT1Q16394 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
EXT1Q16394 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.07□□□□□ -0.16
EXT1Q16394 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.07□□□□□ -0.16
EXT1Q16394 ACTBP11-201ENST00000436287 1126 ntBASIC14.07□□□□□ -0.16
EXT1Q16394 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.07□□□□□ -0.16
EXT1Q16394 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.07□□□□□ -0.16
EXT1Q16394 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.07□□□□□ -0.16
EXT1Q16394 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.07□□□□□ -0.16
EXT1Q16394 RN7SL219P-201ENST00000582872 296 ntBASIC14.07□□□□□ -0.16
EXT1Q16394 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
EXT1Q16394 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
EXT1Q16394 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.07□□□□□ -0.16
EXT1Q16394 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.07□□□□□ -0.16
EXT1Q16394 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
EXT1Q16394 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.07□□□□□ -0.16
EXT1Q16394 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
EXT1Q16394 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EXT1Q16394 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
EXT1Q16394 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
EXT1Q16394 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
EXT1Q16394 KRT8P44-201ENST00000441609 1350 ntBASIC14.07□□□□□ -0.16
EXT1Q16394 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
EXT1Q16394 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EXT1Q16394 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
EXT1Q16394 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
EXT1Q16394 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
EXT1Q16394 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
EXT1Q16394 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
EXT1Q16394 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
EXT1Q16394 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
EXT1Q16394 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
EXT1Q16394 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms