Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RPL39P62891 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RPL39P62891 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
RPL39P62891 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
RPL39P62891 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RPL39P62891 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RPL39P62891 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC10.87□□□□□ -0.67
RPL39P62891 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RPL39P62891 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
RPL39P62891 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RPL39P62891 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
RPL39P62891 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RPL39P62891 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC10.87□□□□□ -0.67
RPL39P62891 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC10.87□□□□□ -0.67
RPL39P62891 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RPL39P62891 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RPL39P62891 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RPL39P62891 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC10.87□□□□□ -0.67
RPL39P62891 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC10.87□□□□□ -0.67
RPL39P62891 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RPL39P62891 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC10.87□□□□□ -0.67
RPL39P62891 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
RPL39P62891 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC10.87□□□□□ -0.67
RPL39P62891 AZGP1P1-201ENST00000411909 902 ntBASIC10.87□□□□□ -0.67
RPL39P62891 AC136604.1-201ENST00000418535 575 ntBASIC10.87□□□□□ -0.67
RPL39P62891 EMBP1-201ENST00000458200 901 ntBASIC10.87□□□□□ -0.67
RPL39P62891 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC10.87□□□□□ -0.67
RPL39P62891 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC10.87□□□□□ -0.67
RPL39P62891 RNA5SP415-201ENST00000517246 115 ntBASIC10.87□□□□□ -0.67
RPL39P62891 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RPL39P62891 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC10.87□□□□□ -0.67
RPL39P62891 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
RPL39P62891 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC10.87□□□□□ -0.67
RPL39P62891 RARRES2P8-201ENST00000566335 367 ntBASIC10.87□□□□□ -0.67
RPL39P62891 AC027307.2-201ENST00000591252 911 ntBASIC10.87□□□□□ -0.67
RPL39P62891 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RPL39P62891 AL445228.2-201ENST00000605589 952 ntBASIC10.87□□□□□ -0.67
RPL39P62891 PRKN-208ENST00000610470 531 ntTSL 2 BASIC10.87□□□□□ -0.67
RPL39P62891 PRKN-209ENST00000612485 225 ntTSL 5 BASIC10.87□□□□□ -0.67
RPL39P62891 AL031008.1-201ENST00000619963 541 ntBASIC10.87□□□□□ -0.67
RPL39P62891 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
RPL39P62891 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RPL39P62891 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RPL39P62891 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RPL39P62891 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RPL39P62891 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
RPL39P62891 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC10.87□□□□□ -0.67
RPL39P62891 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RPL39P62891 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
RPL39P62891 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
RPL39P62891 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RPL39P62891 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RPL39P62891 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RPL39P62891 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC10.87□□□□□ -0.67
RPL39P62891 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RPL39P62891 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
RPL39P62891 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC10.87□□□□□ -0.67
RPL39P62891 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RPL39P62891 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RPL39P62891 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC10.87□□□□□ -0.67
RPL39P62891 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RPL39P62891 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
RPL39P62891 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RPL39P62891 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RPL39P62891 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
RPL39P62891 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC10.87□□□□□ -0.67
RPL39P62891 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC10.87□□□□□ -0.67
RPL39P62891 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
RPL39P62891 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC10.86□□□□□ -0.67
RPL39P62891 AC089987.1-201ENST00000551654 2209 ntBASIC10.86□□□□□ -0.67
RPL39P62891 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC10.86□□□□□ -0.67
RPL39P62891 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RPL39P62891 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
RPL39P62891 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
RPL39P62891 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RPL39P62891 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
RPL39P62891 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
RPL39P62891 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
RPL39P62891 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RPL39P62891 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
RPL39P62891 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
RPL39P62891 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
RPL39P62891 MBLAC2-202ENST00000514906 1936 ntBASIC10.86□□□□□ -0.67
RPL39P62891 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RPL39P62891 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
RPL39P62891 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
RPL39P62891 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC10.86□□□□□ -0.67
RPL39P62891 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RPL39P62891 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RPL39P62891 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RPL39P62891 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RPL39P62891 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC10.86□□□□□ -0.67
RPL39P62891 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RPL39P62891 FAM220BP-201ENST00000377689 816 ntBASIC10.86□□□□□ -0.67
RPL39P62891 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
RPL39P62891 AC002056.1-201ENST00000395613 760 ntBASIC10.86□□□□□ -0.67
RPL39P62891 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC10.86□□□□□ -0.67
RPL39P62891 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC10.86□□□□□ -0.67
RPL39P62891 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC10.86□□□□□ -0.67
RPL39P62891 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC10.86□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms