Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SPCS3P61009 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SPCS3P61009 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SPCS3P61009 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SPCS3P61009 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SPCS3P61009 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.55□□□□□ -0.4
SPCS3P61009 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.55□□□□□ -0.4
SPCS3P61009 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SPCS3P61009 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SPCS3P61009 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SPCS3P61009 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SPCS3P61009 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC12.54□□□□□ -0.4
SPCS3P61009 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.54□□□□□ -0.4
SPCS3P61009 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SPCS3P61009 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
SPCS3P61009 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SPCS3P61009 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SPCS3P61009 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SPCS3P61009 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SPCS3P61009 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SPCS3P61009 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.54□□□□□ -0.4
SPCS3P61009 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SPCS3P61009 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SPCS3P61009 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SPCS3P61009 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC12.54□□□□□ -0.4
SPCS3P61009 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SPCS3P61009 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
SPCS3P61009 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SPCS3P61009 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SPCS3P61009 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
SPCS3P61009 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SPCS3P61009 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SPCS3P61009 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SPCS3P61009 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SPCS3P61009 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SPCS3P61009 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SPCS3P61009 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SPCS3P61009 FAM58CP-201ENST00000435741 640 ntBASIC12.54□□□□□ -0.4
SPCS3P61009 SPCS2P4-201ENST00000436160 681 ntBASIC12.54□□□□□ -0.4
SPCS3P61009 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.54□□□□□ -0.4
SPCS3P61009 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC12.54□□□□□ -0.4
SPCS3P61009 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC12.54□□□□□ -0.4
SPCS3P61009 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.54□□□□□ -0.4
SPCS3P61009 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SPCS3P61009 RPL18-209ENST00000550645 463 ntTSL 5 BASIC12.54□□□□□ -0.4
SPCS3P61009 RPL18-214ENST00000552588 559 ntTSL 3 BASIC12.54□□□□□ -0.4
SPCS3P61009 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC12.54□□□□□ -0.4
SPCS3P61009 LINC01225-203ENST00000563550 1244 ntBASIC12.54□□□□□ -0.4
SPCS3P61009 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC12.54□□□□□ -0.4
SPCS3P61009 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.54□□□□□ -0.4
SPCS3P61009 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC12.54□□□□□ -0.4
SPCS3P61009 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SPCS3P61009 AC011467.4-201ENST00000594891 528 ntBASIC12.54□□□□□ -0.4
SPCS3P61009 AP3S2-216ENST00000617003 1561 ntBASIC12.54□□□□□ -0.4
SPCS3P61009 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SPCS3P61009 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SPCS3P61009 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SPCS3P61009 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SPCS3P61009 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
SPCS3P61009 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SPCS3P61009 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SPCS3P61009 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SPCS3P61009 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SPCS3P61009 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SPCS3P61009 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC12.54□□□□□ -0.4
SPCS3P61009 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SPCS3P61009 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SPCS3P61009 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SPCS3P61009 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
SPCS3P61009 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPCS3P61009 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.53□□□□□ -0.4
SPCS3P61009 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPCS3P61009 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPCS3P61009 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPCS3P61009 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
SPCS3P61009 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC12.53□□□□□ -0.4
SPCS3P61009 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPCS3P61009 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SPCS3P61009 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SPCS3P61009 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPCS3P61009 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.53□□□□□ -0.4
SPCS3P61009 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPCS3P61009 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SPCS3P61009 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPCS3P61009 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
SPCS3P61009 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC12.53□□□□□ -0.4
SPCS3P61009 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.53□□□□□ -0.4
SPCS3P61009 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SPCS3P61009 AC009078.2-202ENST00000463353 338 ntBASIC12.53□□□□□ -0.4
SPCS3P61009 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SPCS3P61009 AC079140.1-201ENST00000508039 487 ntBASIC12.53□□□□□ -0.4
SPCS3P61009 GATB-205ENST00000508611 605 ntTSL 2 BASIC12.53□□□□□ -0.4
SPCS3P61009 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.53□□□□□ -0.4
SPCS3P61009 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC12.53□□□□□ -0.4
SPCS3P61009 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
SPCS3P61009 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC12.53□□□□□ -0.4
SPCS3P61009 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC12.53□□□□□ -0.4
SPCS3P61009 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.53□□□□□ -0.4
SPCS3P61009 AC027601.4-201ENST00000611259 610 ntBASIC12.53□□□□□ -0.4
SPCS3P61009 AC092902.6-201ENST00000641783 218 ntBASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms