Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC19.95■□□□□ 0.78
RIPK4P57078 AC023157.3-201ENST00000619086 2088 ntBASIC19.95■□□□□ 0.78
RIPK4P57078 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RIPK4P57078 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RIPK4P57078 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RIPK4P57078 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RIPK4P57078 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RIPK4P57078 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC19.95■□□□□ 0.78
RIPK4P57078 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC19.95■□□□□ 0.78
RIPK4P57078 AL590640.2-201ENST00000457038 527 ntBASIC19.95■□□□□ 0.78
RIPK4P57078 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RIPK4P57078 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC19.95■□□□□ 0.78
RIPK4P57078 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC19.95■□□□□ 0.78
RIPK4P57078 AC078819.1-201ENST00000547454 765 ntBASIC19.95■□□□□ 0.78
RIPK4P57078 AC012085.1-201ENST00000548270 765 ntBASIC19.95■□□□□ 0.78
RIPK4P57078 AP005482.1-201ENST00000563722 1273 ntBASIC19.95■□□□□ 0.78
RIPK4P57078 AL359881.2-201ENST00000602973 570 ntBASIC19.95■□□□□ 0.78
RIPK4P57078 LARP4-220ENST00000615080 856 ntTSL 5 BASIC19.95■□□□□ 0.78
RIPK4P57078 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RIPK4P57078 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RIPK4P57078 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RIPK4P57078 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RIPK4P57078 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RIPK4P57078 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RIPK4P57078 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RIPK4P57078 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RIPK4P57078 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RIPK4P57078 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC19.94■□□□□ 0.78
RIPK4P57078 PARN-202ENST00000420015 2360 ntTSL 2 BASIC19.94■□□□□ 0.78
RIPK4P57078 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC19.94■□□□□ 0.78
RIPK4P57078 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RIPK4P57078 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RIPK4P57078 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RIPK4P57078 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RIPK4P57078 PCDHGB8P-201ENST00000502926 1973 ntBASIC19.94■□□□□ 0.78
RIPK4P57078 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC19.94■□□□□ 0.78
RIPK4P57078 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC19.94■□□□□ 0.78
RIPK4P57078 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RIPK4P57078 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RIPK4P57078 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RIPK4P57078 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
RIPK4P57078 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
RIPK4P57078 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RIPK4P57078 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RIPK4P57078 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC19.94■□□□□ 0.78
RIPK4P57078 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RIPK4P57078 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC19.94■□□□□ 0.78
RIPK4P57078 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RIPK4P57078 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
RIPK4P57078 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC19.94■□□□□ 0.78
RIPK4P57078 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RIPK4P57078 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RIPK4P57078 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC19.94■□□□□ 0.78
RIPK4P57078 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC19.94■□□□□ 0.78
RIPK4P57078 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RIPK4P57078 AC026434.2-201ENST00000506094 1078 ntBASIC19.94■□□□□ 0.78
RIPK4P57078 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC19.94■□□□□ 0.78
RIPK4P57078 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC19.94■□□□□ 0.78
RIPK4P57078 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC19.94■□□□□ 0.78
RIPK4P57078 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RIPK4P57078 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC19.94■□□□□ 0.78
RIPK4P57078 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
RIPK4P57078 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RIPK4P57078 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
RIPK4P57078 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RIPK4P57078 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RIPK4P57078 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
RIPK4P57078 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC19.94■□□□□ 0.78
RIPK4P57078 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RIPK4P57078 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC19.94■□□□□ 0.78
RIPK4P57078 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RIPK4P57078 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RIPK4P57078 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
RIPK4P57078 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC19.93■□□□□ 0.78
RIPK4P57078 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC19.93■□□□□ 0.78
RIPK4P57078 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC19.93■□□□□ 0.78
RIPK4P57078 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RIPK4P57078 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RIPK4P57078 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RIPK4P57078 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC19.93■□□□□ 0.78
RIPK4P57078 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RIPK4P57078 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RIPK4P57078 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RIPK4P57078 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC19.93■□□□□ 0.78
RIPK4P57078 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RIPK4P57078 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RIPK4P57078 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RIPK4P57078 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC19.93■□□□□ 0.78
RIPK4P57078 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC19.93■□□□□ 0.78
RIPK4P57078 KRT223P-202ENST00000449164 1292 ntBASIC19.93■□□□□ 0.78
RIPK4P57078 RNA5SP486-201ENST00000515961 83 ntBASIC19.93■□□□□ 0.78
RIPK4P57078 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC19.93■□□□□ 0.78
RIPK4P57078 RN7SL48P-201ENST00000579283 293 ntBASIC19.93■□□□□ 0.78
RIPK4P57078 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC19.93■□□□□ 0.78
RIPK4P57078 AC133552.6-201ENST00000613406 534 ntBASIC19.93■□□□□ 0.78
RIPK4P57078 ENPP7P14-201ENST00000621765 1040 ntBASIC19.93■□□□□ 0.78
RIPK4P57078 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC19.93■□□□□ 0.78
RIPK4P57078 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RIPK4P57078 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RIPK4P57078 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms