Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC17■□□□□ 0.31
TM4SF4P48230 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TM4SF4P48230 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TM4SF4P48230 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TM4SF4P48230 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17■□□□□ 0.31
TM4SF4P48230 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TM4SF4P48230 TMBIM7P-202ENST00000641474 1516 ntBASIC17■□□□□ 0.31
TM4SF4P48230 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TM4SF4P48230 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17■□□□□ 0.31
TM4SF4P48230 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM4SF4P48230 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.99■□□□□ 0.31
TM4SF4P48230 AC012508.2-201ENST00000567613 1472 ntBASIC16.99■□□□□ 0.31
TM4SF4P48230 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM4SF4P48230 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TM4SF4P48230 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM4SF4P48230 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.99■□□□□ 0.31
TM4SF4P48230 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC16.99■□□□□ 0.31
TM4SF4P48230 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.99■□□□□ 0.31
TM4SF4P48230 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM4SF4P48230 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM4SF4P48230 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TM4SF4P48230 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM4SF4P48230 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC16.99■□□□□ 0.31
TM4SF4P48230 AL512306.1-201ENST00000432698 848 ntBASIC16.99■□□□□ 0.31
TM4SF4P48230 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC16.99■□□□□ 0.31
TM4SF4P48230 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TM4SF4P48230 AC003686.1-201ENST00000550956 1034 ntBASIC16.99■□□□□ 0.31
TM4SF4P48230 AC140113.1-201ENST00000603467 169 ntBASIC16.99■□□□□ 0.31
TM4SF4P48230 AL022334.2-201ENST00000610000 484 ntBASIC16.99■□□□□ 0.31
TM4SF4P48230 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM4SF4P48230 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.99■□□□□ 0.31
TM4SF4P48230 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TM4SF4P48230 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TM4SF4P48230 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM4SF4P48230 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.99■□□□□ 0.31
TM4SF4P48230 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM4SF4P48230 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.99■□□□□ 0.31
TM4SF4P48230 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM4SF4P48230 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TM4SF4P48230 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TM4SF4P48230 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TM4SF4P48230 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TM4SF4P48230 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TM4SF4P48230 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.98■□□□□ 0.31
TM4SF4P48230 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TM4SF4P48230 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TM4SF4P48230 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
TM4SF4P48230 AC021305.1-201ENST00000520656 1514 ntBASIC16.98■□□□□ 0.31
TM4SF4P48230 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
TM4SF4P48230 AL357373.1-201ENST00000394974 322 ntBASIC16.98■□□□□ 0.31
TM4SF4P48230 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.98■□□□□ 0.31
TM4SF4P48230 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.98■□□□□ 0.31
TM4SF4P48230 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC16.98■□□□□ 0.31
TM4SF4P48230 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC16.98■□□□□ 0.31
TM4SF4P48230 RN7SL530P-201ENST00000485097 298 ntBASIC16.98■□□□□ 0.31
TM4SF4P48230 GCOM2-201ENST00000509133 1104 ntBASIC16.98■□□□□ 0.31
TM4SF4P48230 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC16.98■□□□□ 0.31
TM4SF4P48230 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC16.98■□□□□ 0.31
TM4SF4P48230 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC16.98■□□□□ 0.31
TM4SF4P48230 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TM4SF4P48230 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TM4SF4P48230 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.98■□□□□ 0.31
TM4SF4P48230 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TM4SF4P48230 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.98■□□□□ 0.31
TM4SF4P48230 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TM4SF4P48230 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.98■□□□□ 0.31
TM4SF4P48230 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TM4SF4P48230 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TM4SF4P48230 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TM4SF4P48230 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM4SF4P48230 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TM4SF4P48230 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TM4SF4P48230 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM4SF4P48230 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM4SF4P48230 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TM4SF4P48230 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM4SF4P48230 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM4SF4P48230 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM4SF4P48230 KRT17P5-201ENST00000332088 839 ntBASIC16.97■□□□□ 0.31
TM4SF4P48230 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TM4SF4P48230 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM4SF4P48230 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TM4SF4P48230 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC16.97■□□□□ 0.31
TM4SF4P48230 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC16.97■□□□□ 0.31
TM4SF4P48230 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC16.97■□□□□ 0.31
TM4SF4P48230 AC006548.2-201ENST00000605217 529 ntBASIC16.97■□□□□ 0.31
TM4SF4P48230 AC012073.1-201ENST00000606114 1108 ntBASIC16.97■□□□□ 0.31
TM4SF4P48230 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TM4SF4P48230 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM4SF4P48230 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TM4SF4P48230 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
TM4SF4P48230 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.97■□□□□ 0.31
TM4SF4P48230 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.97■□□□□ 0.31
TM4SF4P48230 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.97■□□□□ 0.31
TM4SF4P48230 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.97■□□□□ 0.31
TM4SF4P48230 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TM4SF4P48230 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.97■□□□□ 0.31
TM4SF4P48230 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
TM4SF4P48230 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TM4SF4P48230 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms