Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
HADHAP40939 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
HADHAP40939 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.52■□□□□ 0.08
HADHAP40939 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
HADHAP40939 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HADHAP40939 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
HADHAP40939 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HADHAP40939 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.52■□□□□ 0.08
HADHAP40939 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.52■□□□□ 0.08
HADHAP40939 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
HADHAP40939 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.52■□□□□ 0.08
HADHAP40939 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.52■□□□□ 0.08
HADHAP40939 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.52■□□□□ 0.08
HADHAP40939 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HADHAP40939 SPDYE19P-201ENST00000338590 713 ntBASIC15.52■□□□□ 0.08
HADHAP40939 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
HADHAP40939 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.52■□□□□ 0.08
HADHAP40939 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
HADHAP40939 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HADHAP40939 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.52■□□□□ 0.08
HADHAP40939 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.52■□□□□ 0.08
HADHAP40939 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.52■□□□□ 0.08
HADHAP40939 AL589987.1-201ENST00000453380 819 ntBASIC15.52■□□□□ 0.08
HADHAP40939 AC093004.1-201ENST00000508850 424 ntBASIC15.52■□□□□ 0.08
HADHAP40939 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.52■□□□□ 0.08
HADHAP40939 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.52■□□□□ 0.08
HADHAP40939 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HADHAP40939 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.52■□□□□ 0.08
HADHAP40939 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
HADHAP40939 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.52■□□□□ 0.08
HADHAP40939 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HADHAP40939 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.52■□□□□ 0.08
HADHAP40939 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
HADHAP40939 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
HADHAP40939 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.52■□□□□ 0.08
HADHAP40939 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HADHAP40939 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HADHAP40939 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
HADHAP40939 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HADHAP40939 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HADHAP40939 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.52■□□□□ 0.07
HADHAP40939 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HADHAP40939 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HADHAP40939 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.52■□□□□ 0.07
HADHAP40939 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HADHAP40939 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HADHAP40939 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HADHAP40939 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.07
HADHAP40939 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HADHAP40939 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
HADHAP40939 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.52■□□□□ 0.07
HADHAP40939 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
HADHAP40939 AC106881.1-201ENST00000605849 3329 ntBASIC15.51■□□□□ 0.07
HADHAP40939 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HADHAP40939 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HADHAP40939 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HADHAP40939 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
HADHAP40939 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
HADHAP40939 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
HADHAP40939 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HADHAP40939 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.51■□□□□ 0.07
HADHAP40939 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HADHAP40939 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HADHAP40939 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.51■□□□□ 0.07
HADHAP40939 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HADHAP40939 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HADHAP40939 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
HADHAP40939 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HADHAP40939 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HADHAP40939 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HADHAP40939 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HADHAP40939 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HADHAP40939 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HADHAP40939 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.51■□□□□ 0.07
HADHAP40939 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.51■□□□□ 0.07
HADHAP40939 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.51■□□□□ 0.07
HADHAP40939 FAM207CP-201ENST00000443486 507 ntBASIC15.51■□□□□ 0.07
HADHAP40939 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.51■□□□□ 0.07
HADHAP40939 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.51■□□□□ 0.07
HADHAP40939 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.51■□□□□ 0.07
HADHAP40939 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.51■□□□□ 0.07
HADHAP40939 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
HADHAP40939 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HADHAP40939 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HADHAP40939 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.51■□□□□ 0.07
HADHAP40939 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.51■□□□□ 0.07
HADHAP40939 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HADHAP40939 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
HADHAP40939 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.51■□□□□ 0.07
HADHAP40939 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
HADHAP40939 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.51■□□□□ 0.07
HADHAP40939 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HADHAP40939 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
HADHAP40939 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HADHAP40939 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HADHAP40939 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
HADHAP40939 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HADHAP40939 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.5■□□□□ 0.07
HADHAP40939 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HADHAP40939 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms