Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.17■□□□□ 0.18
CHKAP35790 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.17■□□□□ 0.18
CHKAP35790 AC015936.2-201ENST00000593177 259 ntBASIC16.17■□□□□ 0.18
CHKAP35790 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
CHKAP35790 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHKAP35790 AL162274.1-201ENST00000617191 1098 ntBASIC16.17■□□□□ 0.18
CHKAP35790 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.17■□□□□ 0.18
CHKAP35790 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHKAP35790 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.17■□□□□ 0.18
CHKAP35790 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHKAP35790 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHKAP35790 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.17■□□□□ 0.18
CHKAP35790 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHKAP35790 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHKAP35790 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHKAP35790 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHKAP35790 NFIC-211ENST00000641145 8399 ntBASIC16.17■□□□□ 0.18
CHKAP35790 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CHKAP35790 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHKAP35790 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHKAP35790 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHKAP35790 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHKAP35790 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHKAP35790 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CHKAP35790 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHKAP35790 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHKAP35790 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.16■□□□□ 0.18
CHKAP35790 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.16■□□□□ 0.18
CHKAP35790 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.16■□□□□ 0.18
CHKAP35790 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHKAP35790 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHKAP35790 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHKAP35790 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHKAP35790 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHKAP35790 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CHKAP35790 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHKAP35790 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CHKAP35790 AL359258.3-201ENST00000622910 2331 ntBASIC16.16■□□□□ 0.18
CHKAP35790 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHKAP35790 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHKAP35790 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHKAP35790 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHKAP35790 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
CHKAP35790 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.16■□□□□ 0.18
CHKAP35790 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.16■□□□□ 0.18
CHKAP35790 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHKAP35790 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHKAP35790 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.16■□□□□ 0.18
CHKAP35790 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.16■□□□□ 0.18
CHKAP35790 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.16■□□□□ 0.18
CHKAP35790 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.16■□□□□ 0.18
CHKAP35790 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHKAP35790 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.16■□□□□ 0.18
CHKAP35790 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CHKAP35790 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.16■□□□□ 0.18
CHKAP35790 AL049840.4-201ENST00000602422 811 ntBASIC16.16■□□□□ 0.18
CHKAP35790 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.16■□□□□ 0.18
CHKAP35790 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.16■□□□□ 0.18
CHKAP35790 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.16■□□□□ 0.18
CHKAP35790 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHKAP35790 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.16■□□□□ 0.18
CHKAP35790 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
CHKAP35790 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHKAP35790 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHKAP35790 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.16■□□□□ 0.18
CHKAP35790 AC005912.2-201ENST00000619492 2400 ntBASIC16.16■□□□□ 0.18
CHKAP35790 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
CHKAP35790 INTS4P2-202ENST00000614726 2019 ntBASIC16.16■□□□□ 0.18
CHKAP35790 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHKAP35790 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHKAP35790 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CHKAP35790 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHKAP35790 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHKAP35790 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHKAP35790 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.15■□□□□ 0.18
CHKAP35790 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CHKAP35790 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CHKAP35790 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHKAP35790 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
CHKAP35790 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.15■□□□□ 0.18
CHKAP35790 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHKAP35790 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHKAP35790 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHKAP35790 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHKAP35790 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHKAP35790 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHKAP35790 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHKAP35790 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHKAP35790 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHKAP35790 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHKAP35790 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHKAP35790 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.15■□□□□ 0.18
CHKAP35790 SOCS2P1-201ENST00000417727 557 ntBASIC16.15■□□□□ 0.18
CHKAP35790 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.15■□□□□ 0.18
CHKAP35790 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.15■□□□□ 0.18
CHKAP35790 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.15■□□□□ 0.18
CHKAP35790 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.15■□□□□ 0.18
CHKAP35790 CU634019.7-201ENST00000624153 1185 ntBASIC16.15■□□□□ 0.18
CHKAP35790 FP236241.2-201ENST00000624906 1185 ntBASIC16.15■□□□□ 0.18
CHKAP35790 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms