Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 ACTBP11-201ENST00000436287 1126 ntBASIC17.34■□□□□ 0.37
HOXA13P31271 AC245100.3-201ENST00000441281 285 ntBASIC17.34■□□□□ 0.37
HOXA13P31271 POM121L9P-203ENST00000441984 1285 ntBASIC17.34■□□□□ 0.37
HOXA13P31271 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.34■□□□□ 0.37
HOXA13P31271 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HOXA13P31271 TUBB1P1-201ENST00000503144 1300 ntBASIC17.34■□□□□ 0.37
HOXA13P31271 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.34■□□□□ 0.37
HOXA13P31271 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HOXA13P31271 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
HOXA13P31271 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HOXA13P31271 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HOXA13P31271 DUX4L47-201ENST00000566374 394 ntBASIC17.34■□□□□ 0.37
HOXA13P31271 DUX4L45-201ENST00000566406 1057 ntBASIC17.34■□□□□ 0.37
HOXA13P31271 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.34■□□□□ 0.37
HOXA13P31271 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HOXA13P31271 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.34■□□□□ 0.37
HOXA13P31271 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXA13P31271 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.34■□□□□ 0.37
HOXA13P31271 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.34■□□□□ 0.37
HOXA13P31271 FER1L4-210ENST00000615531 5998 ntBASIC17.34■□□□□ 0.37
HOXA13P31271 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXA13P31271 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HOXA13P31271 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXA13P31271 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.34■□□□□ 0.37
HOXA13P31271 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
HOXA13P31271 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
HOXA13P31271 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HOXA13P31271 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HOXA13P31271 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXA13P31271 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.34■□□□□ 0.37
HOXA13P31271 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXA13P31271 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HOXA13P31271 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HOXA13P31271 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HOXA13P31271 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HOXA13P31271 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HOXA13P31271 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
HOXA13P31271 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.33■□□□□ 0.37
HOXA13P31271 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HOXA13P31271 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.33■□□□□ 0.37
HOXA13P31271 AC126365.1-201ENST00000578585 1514 ntBASIC17.33■□□□□ 0.37
HOXA13P31271 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
HOXA13P31271 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HOXA13P31271 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
HOXA13P31271 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
HOXA13P31271 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HOXA13P31271 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HOXA13P31271 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HOXA13P31271 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.33■□□□□ 0.36
HOXA13P31271 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HOXA13P31271 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.33■□□□□ 0.36
HOXA13P31271 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
HOXA13P31271 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
HOXA13P31271 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.33■□□□□ 0.36
HOXA13P31271 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.33■□□□□ 0.36
HOXA13P31271 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.33■□□□□ 0.36
HOXA13P31271 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HOXA13P31271 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.33■□□□□ 0.36
HOXA13P31271 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HOXA13P31271 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.33■□□□□ 0.36
HOXA13P31271 RN7SL560P-201ENST00000577943 264 ntBASIC17.33■□□□□ 0.36
HOXA13P31271 RN7SL219P-201ENST00000582872 296 ntBASIC17.33■□□□□ 0.36
HOXA13P31271 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HOXA13P31271 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.33■□□□□ 0.36
HOXA13P31271 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.33■□□□□ 0.36
HOXA13P31271 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HOXA13P31271 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HOXA13P31271 AC091951.1-201ENST00000512854 2465 ntBASIC17.33■□□□□ 0.36
HOXA13P31271 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
HOXA13P31271 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HOXA13P31271 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.33■□□□□ 0.36
HOXA13P31271 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.33■□□□□ 0.36
HOXA13P31271 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.33■□□□□ 0.36
HOXA13P31271 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
HOXA13P31271 AC013268.4-201ENST00000637413 2228 ntBASIC17.33■□□□□ 0.36
HOXA13P31271 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.33■□□□□ 0.36
HOXA13P31271 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.33■□□□□ 0.36
HOXA13P31271 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HOXA13P31271 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HOXA13P31271 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HOXA13P31271 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HOXA13P31271 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.32■□□□□ 0.36
HOXA13P31271 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HOXA13P31271 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXA13P31271 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.32■□□□□ 0.36
HOXA13P31271 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.32■□□□□ 0.36
HOXA13P31271 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXA13P31271 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.32■□□□□ 0.36
HOXA13P31271 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXA13P31271 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.32■□□□□ 0.36
HOXA13P31271 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HOXA13P31271 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.32■□□□□ 0.36
HOXA13P31271 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HOXA13P31271 BRWD1P1-201ENST00000401091 371 ntBASIC17.32■□□□□ 0.36
HOXA13P31271 CD8B2-202ENST00000417670 633 ntBASIC17.32■□□□□ 0.36
HOXA13P31271 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.32■□□□□ 0.36
HOXA13P31271 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HOXA13P31271 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.32■□□□□ 0.36
HOXA13P31271 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HOXA13P31271 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms