Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RXRBP28702 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.45■□□□□ 0.7
RXRBP28702 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RXRBP28702 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RXRBP28702 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC19.45■□□□□ 0.7
RXRBP28702 GGTLC4P-201ENST00000402176 664 ntBASIC19.45■□□□□ 0.7
RXRBP28702 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC19.45■□□□□ 0.7
RXRBP28702 SOD2-205ENST00000444946 917 ntTSL 2 BASIC19.45■□□□□ 0.7
RXRBP28702 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RXRBP28702 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC19.45■□□□□ 0.7
RXRBP28702 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RXRBP28702 MIR4254-201ENST00000581063 76 ntBASIC19.45■□□□□ 0.7
RXRBP28702 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC19.45■□□□□ 0.7
RXRBP28702 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC19.45■□□□□ 0.7
RXRBP28702 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC19.45■□□□□ 0.7
RXRBP28702 HELLS-212ENST00000630929 400 ntTSL 5 BASIC19.45■□□□□ 0.7
RXRBP28702 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC19.45■□□□□ 0.7
RXRBP28702 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC19.45■□□□□ 0.7
RXRBP28702 AC105020.1-201ENST00000435356 2205 ntBASIC19.45■□□□□ 0.7
RXRBP28702 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC19.45■□□□□ 0.7
RXRBP28702 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.45■□□□□ 0.7
RXRBP28702 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.45■□□□□ 0.7
RXRBP28702 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RXRBP28702 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RXRBP28702 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RXRBP28702 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RXRBP28702 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RXRBP28702 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RXRBP28702 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RXRBP28702 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RXRBP28702 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC19.44■□□□□ 0.7
RXRBP28702 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RXRBP28702 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RXRBP28702 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RXRBP28702 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RXRBP28702 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RXRBP28702 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RXRBP28702 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
RXRBP28702 MIR648-201ENST00000385046 94 ntBASIC19.44■□□□□ 0.7
RXRBP28702 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RXRBP28702 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC19.44■□□□□ 0.7
RXRBP28702 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC19.44■□□□□ 0.7
RXRBP28702 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC19.44■□□□□ 0.7
RXRBP28702 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RXRBP28702 ALG3P1-201ENST00000508806 1114 ntBASIC19.44■□□□□ 0.7
RXRBP28702 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC19.44■□□□□ 0.7
RXRBP28702 AC013553.1-201ENST00000560906 267 ntBASIC19.44■□□□□ 0.7
RXRBP28702 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RXRBP28702 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RXRBP28702 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RXRBP28702 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RXRBP28702 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC19.44■□□□□ 0.7
RXRBP28702 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
RXRBP28702 AL360270.3-201ENST00000609118 1348 ntBASIC19.44■□□□□ 0.7
RXRBP28702 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
RXRBP28702 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RXRBP28702 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.44■□□□□ 0.7
RXRBP28702 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RXRBP28702 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RXRBP28702 FUCA1P1-201ENST00000374476 1351 ntBASIC19.44■□□□□ 0.7
RXRBP28702 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RXRBP28702 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RXRBP28702 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC19.43■□□□□ 0.7
RXRBP28702 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC19.43■□□□□ 0.7
RXRBP28702 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RXRBP28702 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RXRBP28702 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
RXRBP28702 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.43■□□□□ 0.7
RXRBP28702 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RXRBP28702 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
RXRBP28702 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RXRBP28702 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RXRBP28702 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RXRBP28702 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RXRBP28702 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
RXRBP28702 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC19.43■□□□□ 0.7
RXRBP28702 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC19.43■□□□□ 0.7
RXRBP28702 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
RXRBP28702 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC19.43■□□□□ 0.7
RXRBP28702 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC19.43■□□□□ 0.7
RXRBP28702 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC19.43■□□□□ 0.7
RXRBP28702 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC19.43■□□□□ 0.7
RXRBP28702 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RXRBP28702 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.43■□□□□ 0.7
RXRBP28702 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RXRBP28702 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.43■□□□□ 0.7
RXRBP28702 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.43■□□□□ 0.7
RXRBP28702 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RXRBP28702 RNF216P1-203ENST00000404404 2427 ntBASIC19.43■□□□□ 0.7
RXRBP28702 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RXRBP28702 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RXRBP28702 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RXRBP28702 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC19.43■□□□□ 0.7
RXRBP28702 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.42■□□□□ 0.7
RXRBP28702 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RXRBP28702 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RXRBP28702 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RXRBP28702 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RXRBP28702 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RXRBP28702 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms