Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BRAFP15056 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.82■□□□□ 0.12
BRAFP15056 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRAFP15056 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.82■□□□□ 0.12
BRAFP15056 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.82■□□□□ 0.12
BRAFP15056 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRAFP15056 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRAFP15056 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.82■□□□□ 0.12
BRAFP15056 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRAFP15056 AC006504.5-208ENST00000588784 2401 ntBASIC15.82■□□□□ 0.12
BRAFP15056 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.82■□□□□ 0.12
BRAFP15056 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BRAFP15056 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.81■□□□□ 0.12
BRAFP15056 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.81■□□□□ 0.12
BRAFP15056 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRAFP15056 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.81■□□□□ 0.12
BRAFP15056 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.81■□□□□ 0.12
BRAFP15056 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRAFP15056 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRAFP15056 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRAFP15056 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRAFP15056 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRAFP15056 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
BRAFP15056 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRAFP15056 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRAFP15056 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BRAFP15056 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRAFP15056 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BRAFP15056 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRAFP15056 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.81■□□□□ 0.12
BRAFP15056 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
BRAFP15056 RPL37AP1-201ENST00000412502 279 ntBASIC15.81■□□□□ 0.12
BRAFP15056 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRAFP15056 TSSK5P-201ENST00000423978 907 ntBASIC15.81■□□□□ 0.12
BRAFP15056 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.81■□□□□ 0.12
BRAFP15056 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRAFP15056 RNA5SP421-201ENST00000516864 134 ntBASIC15.81■□□□□ 0.12
BRAFP15056 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
BRAFP15056 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
BRAFP15056 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.81■□□□□ 0.12
BRAFP15056 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
BRAFP15056 WASH3P-207ENST00000560956 1394 ntBASIC15.81■□□□□ 0.12
BRAFP15056 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.81■□□□□ 0.12
BRAFP15056 AL590560.3-201ENST00000623350 461 ntBASIC15.81■□□□□ 0.12
BRAFP15056 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRAFP15056 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRAFP15056 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRAFP15056 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRAFP15056 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
BRAFP15056 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRAFP15056 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.8■□□□□ 0.12
BRAFP15056 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRAFP15056 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BRAFP15056 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
BRAFP15056 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
BRAFP15056 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRAFP15056 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRAFP15056 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
BRAFP15056 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRAFP15056 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRAFP15056 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRAFP15056 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRAFP15056 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRAFP15056 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRAFP15056 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
BRAFP15056 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRAFP15056 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRAFP15056 AC004987.2-201ENST00000395959 1148 ntBASIC15.8■□□□□ 0.12
BRAFP15056 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.8■□□□□ 0.12
BRAFP15056 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.8■□□□□ 0.12
BRAFP15056 AC241585.1-201ENST00000433527 519 ntBASIC15.8■□□□□ 0.12
BRAFP15056 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
BRAFP15056 UGT1A2P-201ENST00000454886 866 ntBASIC15.8■□□□□ 0.12
BRAFP15056 AL079307.3-201ENST00000556114 283 ntBASIC15.8■□□□□ 0.12
BRAFP15056 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.8■□□□□ 0.12
BRAFP15056 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.8■□□□□ 0.12
BRAFP15056 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.8■□□□□ 0.12
BRAFP15056 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BRAFP15056 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.8■□□□□ 0.12
BRAFP15056 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.8■□□□□ 0.12
BRAFP15056 AL450472.2-201ENST00000603663 1156 ntBASIC15.8■□□□□ 0.12
BRAFP15056 AL589739.1-201ENST00000607720 493 ntBASIC15.8■□□□□ 0.12
BRAFP15056 TEX28P1-201ENST00000613479 1221 ntBASIC15.8■□□□□ 0.12
BRAFP15056 TEX28P2-201ENST00000617764 1221 ntBASIC15.8■□□□□ 0.12
BRAFP15056 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
BRAFP15056 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BRAFP15056 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BRAFP15056 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BRAFP15056 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRAFP15056 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.8■□□□□ 0.12
BRAFP15056 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
BRAFP15056 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.8■□□□□ 0.12
BRAFP15056 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BRAFP15056 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
BRAFP15056 ACE3P-201ENST00000423435 1973 ntBASIC15.8■□□□□ 0.12
BRAFP15056 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRAFP15056 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRAFP15056 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.8■□□□□ 0.12
BRAFP15056 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRAFP15056 BX640514.1-201ENST00000583223 1918 ntBASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms