Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 LINC01230-201ENST00000625222 3017 ntBASIC13.86□□□□□ -0.19
CLUP10909 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLUP10909 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.86□□□□□ -0.19
CLUP10909 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLUP10909 AC097359.2-201ENST00000604992 2389 ntBASIC13.86□□□□□ -0.19
CLUP10909 AC018529.2-202ENST00000611482 3087 ntBASIC13.86□□□□□ -0.19
CLUP10909 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLUP10909 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.86□□□□□ -0.19
CLUP10909 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLUP10909 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLUP10909 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLUP10909 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLUP10909 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLUP10909 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.86□□□□□ -0.19
CLUP10909 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLUP10909 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
CLUP10909 FAM8A3P-201ENST00000427218 844 ntBASIC13.86□□□□□ -0.19
CLUP10909 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLUP10909 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.86□□□□□ -0.19
CLUP10909 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.86□□□□□ -0.19
CLUP10909 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.86□□□□□ -0.19
CLUP10909 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.86□□□□□ -0.19
CLUP10909 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.86□□□□□ -0.19
CLUP10909 AL079307.3-201ENST00000556114 283 ntBASIC13.86□□□□□ -0.19
CLUP10909 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.86□□□□□ -0.19
CLUP10909 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.86□□□□□ -0.19
CLUP10909 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
CLUP10909 MIR6080-201ENST00000617359 66 ntBASIC13.86□□□□□ -0.19
CLUP10909 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.86□□□□□ -0.19
CLUP10909 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLUP10909 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLUP10909 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLUP10909 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLUP10909 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLUP10909 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLUP10909 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLUP10909 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
CLUP10909 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLUP10909 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLUP10909 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLUP10909 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLUP10909 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLUP10909 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLUP10909 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLUP10909 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLUP10909 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLUP10909 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLUP10909 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLUP10909 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLUP10909 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
CLUP10909 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
CLUP10909 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLUP10909 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLUP10909 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.85□□□□□ -0.19
CLUP10909 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLUP10909 AL035456.1-201ENST00000456064 1369 ntBASIC13.85□□□□□ -0.19
CLUP10909 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLUP10909 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLUP10909 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLUP10909 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLUP10909 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.85□□□□□ -0.19
CLUP10909 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CLUP10909 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLUP10909 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLUP10909 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CLUP10909 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLUP10909 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLUP10909 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLUP10909 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLUP10909 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CLUP10909 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CLUP10909 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.85□□□□□ -0.19
CLUP10909 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.85□□□□□ -0.19
CLUP10909 GHSR-202ENST00000427970 912 ntBASIC13.85□□□□□ -0.19
CLUP10909 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.85□□□□□ -0.19
CLUP10909 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.85□□□□□ -0.19
CLUP10909 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLUP10909 SLED1-202ENST00000512051 380 ntBASIC13.85□□□□□ -0.19
CLUP10909 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLUP10909 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLUP10909 AC015910.1-201ENST00000579400 975 ntBASIC13.85□□□□□ -0.19
CLUP10909 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.85□□□□□ -0.19
CLUP10909 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
CLUP10909 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.85□□□□□ -0.19
CLUP10909 AF228730.6-201ENST00000641497 218 ntBASIC13.85□□□□□ -0.19
CLUP10909 AC084121.3-201ENST00000641716 218 ntBASIC13.85□□□□□ -0.19
CLUP10909 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLUP10909 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.85□□□□□ -0.19
CLUP10909 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLUP10909 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLUP10909 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.85□□□□□ -0.19
CLUP10909 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.85□□□□□ -0.19
CLUP10909 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLUP10909 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLUP10909 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLUP10909 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CLUP10909 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLUP10909 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLUP10909 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CLUP10909 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms