Protein–RNA interactions for Protein: P0CG21

NHLRC4, NHL-repeat-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC4P0CG21 DRD5P1-201ENST00000456605 1438 ntBASIC11.34□□□□□ -0.59
NHLRC4P0CG21 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
NHLRC4P0CG21 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
NHLRC4P0CG21 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
NHLRC4P0CG21 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
NHLRC4P0CG21 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
NHLRC4P0CG21 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
NHLRC4P0CG21 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC11.34□□□□□ -0.59
NHLRC4P0CG21 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
NHLRC4P0CG21 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
NHLRC4P0CG21 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
NHLRC4P0CG21 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
NHLRC4P0CG21 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
NHLRC4P0CG21 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.59
NHLRC4P0CG21 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 BNIP3P1-202ENST00000550043 1585 ntBASIC11.33□□□□□ -0.6
NHLRC4P0CG21 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 AP001282.1-201ENST00000531301 1499 ntBASIC11.33□□□□□ -0.6
NHLRC4P0CG21 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 NDUFAB1P1-201ENST00000404262 460 ntBASIC11.33□□□□□ -0.6
NHLRC4P0CG21 MIR1202-201ENST00000408529 83 ntBASIC11.33□□□□□ -0.6
NHLRC4P0CG21 AC136604.1-201ENST00000418535 575 ntBASIC11.33□□□□□ -0.6
NHLRC4P0CG21 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 RPSAP36-202ENST00000494591 1261 ntBASIC11.33□□□□□ -0.6
NHLRC4P0CG21 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 AC105129.2-201ENST00000559536 390 ntBASIC11.33□□□□□ -0.6
NHLRC4P0CG21 HNRNPA1P48-202ENST00000565308 961 ntBASIC11.33□□□□□ -0.6
NHLRC4P0CG21 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 NKG7-204ENST00000595217 816 ntTSL 2 BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 AL450472.2-201ENST00000603663 1156 ntBASIC11.33□□□□□ -0.6
NHLRC4P0CG21 AC145423.3-201ENST00000615987 467 ntBASIC11.33□□□□□ -0.6
NHLRC4P0CG21 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 AL592424.1-201ENST00000563624 1536 ntBASIC11.33□□□□□ -0.6
NHLRC4P0CG21 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC11.33□□□□□ -0.6
NHLRC4P0CG21 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 KRT8P35-201ENST00000483942 1338 ntBASIC11.33□□□□□ -0.6
NHLRC4P0CG21 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC11.33□□□□□ -0.6
NHLRC4P0CG21 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NHLRC4P0CG21 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
NHLRC4P0CG21 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NHLRC4P0CG21 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
NHLRC4P0CG21 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NHLRC4P0CG21 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
NHLRC4P0CG21 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NHLRC4P0CG21 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
NHLRC4P0CG21 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NHLRC4P0CG21 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms