Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
FAM228BP0C875 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
FAM228BP0C875 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.31■□□□□ 0.2
FAM228BP0C875 TREML5P-201ENST00000421694 576 ntBASIC16.31■□□□□ 0.2
FAM228BP0C875 TSSK5P-201ENST00000423978 907 ntBASIC16.31■□□□□ 0.2
FAM228BP0C875 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.31■□□□□ 0.2
FAM228BP0C875 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.31■□□□□ 0.2
FAM228BP0C875 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.31■□□□□ 0.2
FAM228BP0C875 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.31■□□□□ 0.2
FAM228BP0C875 TIMM17BP1-201ENST00000545713 516 ntBASIC16.31■□□□□ 0.2
FAM228BP0C875 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.31■□□□□ 0.2
FAM228BP0C875 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.31■□□□□ 0.2
FAM228BP0C875 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
FAM228BP0C875 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.31■□□□□ 0.2
FAM228BP0C875 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
FAM228BP0C875 AL158211.3-201ENST00000607385 239 ntBASIC16.31■□□□□ 0.2
FAM228BP0C875 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FAM228BP0C875 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.31■□□□□ 0.2
FAM228BP0C875 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
FAM228BP0C875 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
FAM228BP0C875 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
FAM228BP0C875 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
FAM228BP0C875 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FAM228BP0C875 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
FAM228BP0C875 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
FAM228BP0C875 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FAM228BP0C875 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FAM228BP0C875 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
FAM228BP0C875 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FAM228BP0C875 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
FAM228BP0C875 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.3■□□□□ 0.2
FAM228BP0C875 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC16.3■□□□□ 0.2
FAM228BP0C875 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FAM228BP0C875 CLK3P2-201ENST00000427566 1453 ntBASIC16.3■□□□□ 0.2
FAM228BP0C875 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
FAM228BP0C875 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC16.3■□□□□ 0.2
FAM228BP0C875 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FAM228BP0C875 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FAM228BP0C875 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
FAM228BP0C875 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.3■□□□□ 0.2
FAM228BP0C875 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
FAM228BP0C875 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FAM228BP0C875 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FAM228BP0C875 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.3■□□□□ 0.2
FAM228BP0C875 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.3■□□□□ 0.2
FAM228BP0C875 KRT18P13-201ENST00000400056 1290 ntBASIC16.3■□□□□ 0.2
FAM228BP0C875 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.3■□□□□ 0.2
FAM228BP0C875 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.3■□□□□ 0.2
FAM228BP0C875 AC009477.1-201ENST00000452936 217 ntBASIC16.3■□□□□ 0.2
FAM228BP0C875 AL589987.1-201ENST00000453380 819 ntBASIC16.3■□□□□ 0.2
FAM228BP0C875 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.3■□□□□ 0.2
FAM228BP0C875 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.3■□□□□ 0.2
FAM228BP0C875 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.3■□□□□ 0.2
FAM228BP0C875 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.3■□□□□ 0.2
FAM228BP0C875 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FAM228BP0C875 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.3■□□□□ 0.2
FAM228BP0C875 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
FAM228BP0C875 AC093028.1-201ENST00000622998 982 ntBASIC16.3■□□□□ 0.2
FAM228BP0C875 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FAM228BP0C875 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.3■□□□□ 0.2
FAM228BP0C875 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FAM228BP0C875 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
FAM228BP0C875 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
FAM228BP0C875 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FAM228BP0C875 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.3■□□□□ 0.2
FAM228BP0C875 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FAM228BP0C875 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.3■□□□□ 0.2
FAM228BP0C875 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FAM228BP0C875 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.29■□□□□ 0.2
FAM228BP0C875 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FAM228BP0C875 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
FAM228BP0C875 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FAM228BP0C875 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FAM228BP0C875 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
FAM228BP0C875 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
FAM228BP0C875 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FAM228BP0C875 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
FAM228BP0C875 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FAM228BP0C875 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC16.29■□□□□ 0.2
FAM228BP0C875 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FAM228BP0C875 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FAM228BP0C875 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FAM228BP0C875 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FAM228BP0C875 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
FAM228BP0C875 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FAM228BP0C875 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FAM228BP0C875 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.29■□□□□ 0.2
FAM228BP0C875 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.29■□□□□ 0.2
FAM228BP0C875 AC004066.1-201ENST00000502488 802 ntBASIC16.29■□□□□ 0.2
FAM228BP0C875 SPDYE18-201ENST00000510091 1050 ntBASIC16.29■□□□□ 0.2
FAM228BP0C875 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
FAM228BP0C875 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
FAM228BP0C875 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.29■□□□□ 0.2
FAM228BP0C875 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
FAM228BP0C875 AC009407.1-201ENST00000568958 598 ntBASIC16.29■□□□□ 0.2
FAM228BP0C875 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.29■□□□□ 0.2
FAM228BP0C875 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.29■□□□□ 0.2
FAM228BP0C875 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
FAM228BP0C875 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FAM228BP0C875 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms