Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 HSPB1P2-201ENST00000448722 546 ntBASIC15.43■□□□□ 0.06
RETP07949 PHKG1P2-201ENST00000457537 863 ntBASIC15.43■□□□□ 0.06
RETP07949 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.43■□□□□ 0.06
RETP07949 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
RETP07949 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC15.43■□□□□ 0.06
RETP07949 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
RETP07949 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.43■□□□□ 0.06
RETP07949 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.43■□□□□ 0.06
RETP07949 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RETP07949 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RETP07949 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RETP07949 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RETP07949 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.43■□□□□ 0.06
RETP07949 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.43■□□□□ 0.06
RETP07949 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
RETP07949 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.43■□□□□ 0.06
RETP07949 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.43■□□□□ 0.06
RETP07949 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.43■□□□□ 0.06
RETP07949 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.43■□□□□ 0.06
RETP07949 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
RETP07949 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
RETP07949 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
RETP07949 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RETP07949 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RETP07949 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.42■□□□□ 0.06
RETP07949 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RETP07949 NFIC-211ENST00000641145 8399 ntBASIC15.42■□□□□ 0.06
RETP07949 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RETP07949 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.42■□□□□ 0.06
RETP07949 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RETP07949 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RETP07949 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RETP07949 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
RETP07949 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC15.42■□□□□ 0.06
RETP07949 AC136604.1-201ENST00000418535 575 ntBASIC15.42■□□□□ 0.06
RETP07949 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.42■□□□□ 0.06
RETP07949 AL590640.2-201ENST00000457038 527 ntBASIC15.42■□□□□ 0.06
RETP07949 AC008267.1-201ENST00000474858 1069 ntBASIC15.42■□□□□ 0.06
RETP07949 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC15.42■□□□□ 0.06
RETP07949 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RETP07949 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
RETP07949 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.42■□□□□ 0.06
RETP07949 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.42■□□□□ 0.06
RETP07949 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC15.42■□□□□ 0.06
RETP07949 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.42■□□□□ 0.06
RETP07949 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RETP07949 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.42■□□□□ 0.06
RETP07949 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RETP07949 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
RETP07949 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RETP07949 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.42■□□□□ 0.06
RETP07949 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RETP07949 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
RETP07949 PRAL-201ENST00000624952 3286 ntBASIC15.42■□□□□ 0.06
RETP07949 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RETP07949 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RETP07949 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RETP07949 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RETP07949 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RETP07949 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RETP07949 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RETP07949 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.41■□□□□ 0.06
RETP07949 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RETP07949 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.41■□□□□ 0.06
RETP07949 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RETP07949 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RETP07949 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RETP07949 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
RETP07949 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
RETP07949 PKD1P5-201ENST00000532415 10291 ntBASIC15.41■□□□□ 0.06
RETP07949 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RETP07949 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.41■□□□□ 0.06
RETP07949 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RETP07949 Z97180.1-201ENST00000445173 988 ntBASIC15.41■□□□□ 0.06
RETP07949 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RETP07949 SUPT4H1P2-201ENST00000501248 353 ntBASIC15.41■□□□□ 0.06
RETP07949 FTLP10-202ENST00000505798 471 ntBASIC15.41■□□□□ 0.06
RETP07949 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
RETP07949 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC15.41■□□□□ 0.06
RETP07949 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.41■□□□□ 0.06
RETP07949 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.41■□□□□ 0.06
RETP07949 MIR3907-201ENST00000579424 151 ntBASIC15.41■□□□□ 0.06
RETP07949 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
RETP07949 AC007663.3-201ENST00000609632 465 ntBASIC15.41■□□□□ 0.06
RETP07949 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.41■□□□□ 0.06
RETP07949 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RETP07949 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RETP07949 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RETP07949 AL354989.2-201ENST00000435838 1540 ntBASIC15.41■□□□□ 0.06
RETP07949 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RETP07949 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.41■□□□□ 0.06
RETP07949 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RETP07949 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.41■□□□□ 0.06
RETP07949 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RETP07949 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RETP07949 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RETP07949 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.41■□□□□ 0.06
RETP07949 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RETP07949 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
RETP07949 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms