Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC18.27■□□□□ 0.52
POLR3DP05423 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
POLR3DP05423 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
POLR3DP05423 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
POLR3DP05423 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
POLR3DP05423 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC18.27■□□□□ 0.52
POLR3DP05423 RPL5P21-201ENST00000404620 815 ntBASIC18.27■□□□□ 0.52
POLR3DP05423 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
POLR3DP05423 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC18.27■□□□□ 0.52
POLR3DP05423 FO681548.1-201ENST00000455617 1132 ntBASIC18.27■□□□□ 0.52
POLR3DP05423 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC18.27■□□□□ 0.52
POLR3DP05423 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC18.27■□□□□ 0.52
POLR3DP05423 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC18.27■□□□□ 0.52
POLR3DP05423 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC18.27■□□□□ 0.52
POLR3DP05423 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC18.27■□□□□ 0.52
POLR3DP05423 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC18.27■□□□□ 0.52
POLR3DP05423 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.27■□□□□ 0.52
POLR3DP05423 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
POLR3DP05423 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.27■□□□□ 0.52
POLR3DP05423 AL033527.4-201ENST00000641026 673 ntBASIC18.27■□□□□ 0.52
POLR3DP05423 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.27■□□□□ 0.52
POLR3DP05423 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.27■□□□□ 0.52
POLR3DP05423 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
POLR3DP05423 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
POLR3DP05423 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.27■□□□□ 0.52
POLR3DP05423 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
POLR3DP05423 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.27■□□□□ 0.51
POLR3DP05423 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.51
POLR3DP05423 AC023824.1-201ENST00000562945 2975 ntBASIC18.27■□□□□ 0.51
POLR3DP05423 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
POLR3DP05423 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
POLR3DP05423 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.26■□□□□ 0.51
POLR3DP05423 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR3DP05423 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
POLR3DP05423 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
POLR3DP05423 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR3DP05423 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
POLR3DP05423 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR3DP05423 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
POLR3DP05423 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR3DP05423 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
POLR3DP05423 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR3DP05423 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
POLR3DP05423 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
POLR3DP05423 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR3DP05423 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
POLR3DP05423 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC18.26■□□□□ 0.51
POLR3DP05423 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.26■□□□□ 0.51
POLR3DP05423 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC18.26■□□□□ 0.51
POLR3DP05423 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC18.26■□□□□ 0.51
POLR3DP05423 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC18.26■□□□□ 0.51
POLR3DP05423 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.26■□□□□ 0.51
POLR3DP05423 RHOXF1P1-202ENST00000635473 501 ntBASIC18.26■□□□□ 0.51
POLR3DP05423 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC18.26■□□□□ 0.51
POLR3DP05423 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR3DP05423 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.26■□□□□ 0.51
POLR3DP05423 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
POLR3DP05423 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR3DP05423 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
POLR3DP05423 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC18.26■□□□□ 0.51
POLR3DP05423 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
POLR3DP05423 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC18.26■□□□□ 0.51
POLR3DP05423 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLR3DP05423 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
POLR3DP05423 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
POLR3DP05423 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
POLR3DP05423 AC148477.4-201ENST00000613430 1793 ntBASIC18.25■□□□□ 0.51
POLR3DP05423 AL109954.1-202ENST00000564051 2148 ntBASIC18.25■□□□□ 0.51
POLR3DP05423 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
POLR3DP05423 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
POLR3DP05423 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC18.25■□□□□ 0.51
POLR3DP05423 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
POLR3DP05423 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLR3DP05423 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
POLR3DP05423 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLR3DP05423 AL158070.2-201ENST00000623713 1621 ntBASIC18.25■□□□□ 0.51
POLR3DP05423 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLR3DP05423 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLR3DP05423 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLR3DP05423 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
POLR3DP05423 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.25■□□□□ 0.51
POLR3DP05423 ACTBP8-201ENST00000403258 1108 ntBASIC18.25■□□□□ 0.51
POLR3DP05423 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
POLR3DP05423 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC18.25■□□□□ 0.51
POLR3DP05423 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
POLR3DP05423 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC18.25■□□□□ 0.51
POLR3DP05423 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.25■□□□□ 0.51
POLR3DP05423 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
POLR3DP05423 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
POLR3DP05423 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC18.25■□□□□ 0.51
POLR3DP05423 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC18.25■□□□□ 0.51
POLR3DP05423 SAMD11P1-201ENST00000571429 661 ntBASIC18.25■□□□□ 0.51
POLR3DP05423 MIR6799-201ENST00000620297 69 ntBASIC18.25■□□□□ 0.51
POLR3DP05423 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC18.25■□□□□ 0.51
POLR3DP05423 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLR3DP05423 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
POLR3DP05423 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.25■□□□□ 0.51
POLR3DP05423 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLR3DP05423 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLR3DP05423 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms