Protein–RNA interactions for Protein: P00736

C1R, Complement C1r subcomponent, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1RP00736 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.05■□□□□ 0.16
C1RP00736 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1RP00736 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.05■□□□□ 0.16
C1RP00736 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1RP00736 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C1RP00736 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.04■□□□□ 0.16
C1RP00736 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.04■□□□□ 0.16
C1RP00736 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1RP00736 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.04■□□□□ 0.16
C1RP00736 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C1RP00736 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1RP00736 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.04■□□□□ 0.16
C1RP00736 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C1RP00736 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
C1RP00736 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
C1RP00736 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
C1RP00736 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.04■□□□□ 0.16
C1RP00736 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.04■□□□□ 0.16
C1RP00736 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
C1RP00736 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.04■□□□□ 0.16
C1RP00736 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.04■□□□□ 0.16
C1RP00736 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
C1RP00736 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C1RP00736 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.04■□□□□ 0.16
C1RP00736 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C1RP00736 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
C1RP00736 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.04■□□□□ 0.16
C1RP00736 AC100757.4-201ENST00000626934 759 ntBASIC16.04■□□□□ 0.16
C1RP00736 AC138627.1-207ENST00000641560 1006 ntBASIC16.04■□□□□ 0.16
C1RP00736 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.04■□□□□ 0.16
C1RP00736 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1RP00736 CICP13-201ENST00000422015 2789 ntBASIC16.04■□□□□ 0.16
C1RP00736 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C1RP00736 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1RP00736 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.04■□□□□ 0.16
C1RP00736 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1RP00736 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1RP00736 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
C1RP00736 AC092127.1-201ENST00000567093 3455 ntBASIC16.04■□□□□ 0.16
C1RP00736 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
C1RP00736 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.04■□□□□ 0.16
C1RP00736 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1RP00736 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.03■□□□□ 0.16
C1RP00736 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.03■□□□□ 0.16
C1RP00736 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
C1RP00736 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.03■□□□□ 0.16
C1RP00736 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
C1RP00736 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1RP00736 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C1RP00736 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
C1RP00736 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
C1RP00736 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1RP00736 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C1RP00736 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C1RP00736 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C1RP00736 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC16.03■□□□□ 0.16
C1RP00736 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.03■□□□□ 0.16
C1RP00736 AC016700.1-201ENST00000429424 312 ntBASIC16.03■□□□□ 0.16
C1RP00736 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.03■□□□□ 0.16
C1RP00736 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC16.03■□□□□ 0.16
C1RP00736 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.03■□□□□ 0.16
C1RP00736 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1RP00736 PARP8-218ENST00000513738 596 ntTSL 4 BASIC16.03■□□□□ 0.16
C1RP00736 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.03■□□□□ 0.16
C1RP00736 ACTG1P17-201ENST00000558391 1119 ntBASIC16.03■□□□□ 0.16
C1RP00736 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.03■□□□□ 0.16
C1RP00736 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.03■□□□□ 0.16
C1RP00736 RN7SL190P-201ENST00000582519 257 ntBASIC16.03■□□□□ 0.16
C1RP00736 AC138466.3-201ENST00000619983 221 ntBASIC16.03■□□□□ 0.16
C1RP00736 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.03■□□□□ 0.16
C1RP00736 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1RP00736 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
C1RP00736 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
C1RP00736 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1RP00736 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.03■□□□□ 0.16
C1RP00736 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1RP00736 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1RP00736 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.03■□□□□ 0.16
C1RP00736 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.03■□□□□ 0.16
C1RP00736 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1RP00736 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1RP00736 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1RP00736 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1RP00736 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
C1RP00736 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.03■□□□□ 0.16
C1RP00736 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1RP00736 AP000593.2-201ENST00000542775 1433 ntBASIC16.02■□□□□ 0.16
C1RP00736 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
C1RP00736 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
C1RP00736 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.02■□□□□ 0.16
C1RP00736 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.02■□□□□ 0.16
C1RP00736 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
C1RP00736 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.02■□□□□ 0.16
C1RP00736 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
C1RP00736 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.02■□□□□ 0.16
C1RP00736 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.02■□□□□ 0.16
C1RP00736 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
C1RP00736 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
C1RP00736 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
C1RP00736 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms