Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 GGTLC4P-201ENST00000402176 664 ntBASIC6.62□□□□□ -1.35
USH2AO75445 AC010894.2-201ENST00000444196 561 ntTSL 3 BASIC6.62□□□□□ -1.35
USH2AO75445 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC6.62□□□□□ -1.35
USH2AO75445 MIR6720-201ENST00000611664 98 ntBASIC6.62□□□□□ -1.35
USH2AO75445 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 OLA1P2-201ENST00000395519 1264 ntBASIC6.62□□□□□ -1.35
USH2AO75445 ORAOV1P1-201ENST00000503108 395 ntBASIC6.62□□□□□ -1.35
USH2AO75445 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC6.62□□□□□ -1.35
USH2AO75445 AC226150.1-201ENST00000544259 466 ntBASIC6.62□□□□□ -1.35
USH2AO75445 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC6.62□□□□□ -1.35
USH2AO75445 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 AC100756.2-201ENST00000569537 736 ntBASIC6.62□□□□□ -1.35
USH2AO75445 MIR4254-201ENST00000581063 76 ntBASIC6.62□□□□□ -1.35
USH2AO75445 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC6.62□□□□□ -1.35
USH2AO75445 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC6.62□□□□□ -1.35
USH2AO75445 AL603764.1-201ENST00000636452 321 ntBASIC6.62□□□□□ -1.35
USH2AO75445 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC6.62□□□□□ -1.35
USH2AO75445 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC6.62□□□□□ -1.35
USH2AO75445 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC6.62□□□□□ -1.35
USH2AO75445 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC6.62□□□□□ -1.35
USH2AO75445 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC6.62□□□□□ -1.35
USH2AO75445 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
USH2AO75445 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC6.62□□□□□ -1.35
USH2AO75445 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC6.62□□□□□ -1.35
USH2AO75445 NQO2-204ENST00000380454 851 ntTSL 2 BASIC6.62□□□□□ -1.35
USH2AO75445 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
USH2AO75445 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC6.62□□□□□ -1.35
USH2AO75445 RPL18AP8-201ENST00000486071 528 ntBASIC6.62□□□□□ -1.35
USH2AO75445 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC6.62□□□□□ -1.35
USH2AO75445 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC6.62□□□□□ -1.35
USH2AO75445 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC6.62□□□□□ -1.35
USH2AO75445 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
USH2AO75445 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
USH2AO75445 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
USH2AO75445 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
USH2AO75445 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 SOD2-205ENST00000444946 917 ntTSL 2 BASIC6.62□□□□□ -1.35
USH2AO75445 AC004923.3-201ENST00000527532 355 ntBASIC6.62□□□□□ -1.35
USH2AO75445 MT2A-202ENST00000561491 581 ntTSL 2 BASIC6.62□□□□□ -1.35
USH2AO75445 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC6.62□□□□□ -1.35
USH2AO75445 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC6.62□□□□□ -1.35
USH2AO75445 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
USH2AO75445 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC6.62□□□□□ -1.35
USH2AO75445 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
USH2AO75445 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC6.61□□□□□ -1.35
USH2AO75445 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC6.61□□□□□ -1.35
USH2AO75445 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
USH2AO75445 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
USH2AO75445 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC6.61□□□□□ -1.35
USH2AO75445 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
USH2AO75445 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC6.61□□□□□ -1.35
USH2AO75445 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
USH2AO75445 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
USH2AO75445 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
USH2AO75445 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
USH2AO75445 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
USH2AO75445 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC6.61□□□□□ -1.35
USH2AO75445 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC6.61□□□□□ -1.35
USH2AO75445 TPT1P11-201ENST00000458482 498 ntBASIC6.61□□□□□ -1.35
USH2AO75445 AC006529.1-201ENST00000459978 637 ntBASIC6.61□□□□□ -1.35
USH2AO75445 RN7SL340P-201ENST00000470792 296 ntBASIC6.61□□□□□ -1.35
USH2AO75445 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms