Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC18.86■□□□□ 0.61
CACNA1FO60840 AL118558.3-201ENST00000607414 1079 ntBASIC18.86■□□□□ 0.61
CACNA1FO60840 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNA1FO60840 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNA1FO60840 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNA1FO60840 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1FO60840 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1FO60840 AC139712.1-201ENST00000378256 1875 ntBASIC18.85■□□□□ 0.61
CACNA1FO60840 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1FO60840 TNRC18P2-201ENST00000417666 2714 ntBASIC18.85■□□□□ 0.61
CACNA1FO60840 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CACNA1FO60840 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1FO60840 AC018735.1-201ENST00000437208 1502 ntBASIC18.85■□□□□ 0.61
CACNA1FO60840 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CACNA1FO60840 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1FO60840 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1FO60840 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC18.85■□□□□ 0.61
CACNA1FO60840 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1FO60840 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC18.85■□□□□ 0.61
CACNA1FO60840 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1FO60840 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CACNA1FO60840 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1FO60840 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CACNA1FO60840 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.85■□□□□ 0.61
CACNA1FO60840 SDHD-202ENST00000525291 790 ntTSL 3 BASIC18.85■□□□□ 0.61
CACNA1FO60840 AL136301.1-201ENST00000615830 422 ntBASIC18.85■□□□□ 0.61
CACNA1FO60840 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC18.85■□□□□ 0.61
CACNA1FO60840 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1FO60840 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CACNA1FO60840 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1FO60840 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
CACNA1FO60840 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1FO60840 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1FO60840 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1FO60840 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1FO60840 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CACNA1FO60840 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
CACNA1FO60840 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA1FO60840 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC18.84■□□□□ 0.61
CACNA1FO60840 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CACNA1FO60840 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1FO60840 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC18.84■□□□□ 0.61
CACNA1FO60840 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1FO60840 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1FO60840 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1FO60840 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1FO60840 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC18.84■□□□□ 0.61
CACNA1FO60840 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CACNA1FO60840 AL645933.1-201ENST00000440087 609 ntBASIC18.84■□□□□ 0.61
CACNA1FO60840 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC18.84■□□□□ 0.61
CACNA1FO60840 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC18.84■□□□□ 0.61
CACNA1FO60840 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.84■□□□□ 0.61
CACNA1FO60840 USB1-203ENST00000539737 1212 ntTSL 2 BASIC18.84■□□□□ 0.61
CACNA1FO60840 RBM8B-201ENST00000555532 525 ntBASIC18.84■□□□□ 0.61
CACNA1FO60840 AC023824.1-201ENST00000562945 2975 ntBASIC18.84■□□□□ 0.61
CACNA1FO60840 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1FO60840 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC18.84■□□□□ 0.61
CACNA1FO60840 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1FO60840 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CACNA1FO60840 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1FO60840 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1FO60840 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1FO60840 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC18.84■□□□□ 0.61
CACNA1FO60840 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1FO60840 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CACNA1FO60840 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC18.84■□□□□ 0.61
CACNA1FO60840 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CACNA1FO60840 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC18.84■□□□□ 0.61
CACNA1FO60840 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CACNA1FO60840 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC18.84■□□□□ 0.61
CACNA1FO60840 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1FO60840 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1FO60840 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1FO60840 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CACNA1FO60840 KRT8P28-201ENST00000433288 1390 ntBASIC18.84■□□□□ 0.61
CACNA1FO60840 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1FO60840 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1FO60840 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1FO60840 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC18.84■□□□□ 0.61
CACNA1FO60840 AC022217.1-201ENST00000521069 738 ntBASIC18.84■□□□□ 0.61
CACNA1FO60840 FAM8A2P-201ENST00000528813 1142 ntBASIC18.84■□□□□ 0.61
CACNA1FO60840 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1FO60840 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC18.84■□□□□ 0.61
CACNA1FO60840 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CACNA1FO60840 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1FO60840 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC18.84■□□□□ 0.61
CACNA1FO60840 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1FO60840 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1FO60840 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC18.84■□□□□ 0.61
CACNA1FO60840 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CACNA1FO60840 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CACNA1FO60840 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CACNA1FO60840 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CACNA1FO60840 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CACNA1FO60840 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CACNA1FO60840 AC004899.1-201ENST00000424687 1714 ntBASIC18.83■□□□□ 0.61
CACNA1FO60840 CICP24-201ENST00000605464 2705 ntBASIC18.83■□□□□ 0.61
CACNA1FO60840 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CACNA1FO60840 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC18.83■□□□□ 0.61
CACNA1FO60840 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms