Protein–RNA interactions for Protein: O15537

RS1, Retinoschisin, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RS1O15537 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RS1O15537 CICP23-201ENST00000605013 2741 ntBASIC11.1□□□□□ -0.63
RS1O15537 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RS1O15537 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
RS1O15537 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
RS1O15537 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC11.1□□□□□ -0.63
RS1O15537 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC11.1□□□□□ -0.63
RS1O15537 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
RS1O15537 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
RS1O15537 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RS1O15537 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RS1O15537 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
RS1O15537 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RS1O15537 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
RS1O15537 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
RS1O15537 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC11.09□□□□□ -0.63
RS1O15537 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC11.09□□□□□ -0.63
RS1O15537 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
RS1O15537 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC11.09□□□□□ -0.63
RS1O15537 AC007292.2-201ENST00000593524 1812 ntBASIC11.09□□□□□ -0.63
RS1O15537 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
RS1O15537 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
RS1O15537 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
RS1O15537 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
RS1O15537 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
RS1O15537 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC11.09□□□□□ -0.63
RS1O15537 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
RS1O15537 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
RS1O15537 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
RS1O15537 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
RS1O15537 RPL13P2-201ENST00000440687 659 ntBASIC11.09□□□□□ -0.63
RS1O15537 PPP6R2P1-201ENST00000450880 1275 ntBASIC11.09□□□□□ -0.63
RS1O15537 AC004967.1-201ENST00000453589 447 ntBASIC11.09□□□□□ -0.63
RS1O15537 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 KRT18P43-201ENST00000469825 1281 ntBASIC11.09□□□□□ -0.63
RS1O15537 RN7SL618P-201ENST00000477850 296 ntBASIC11.09□□□□□ -0.63
RS1O15537 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
RS1O15537 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC11.09□□□□□ -0.63
RS1O15537 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 AC027612.4-201ENST00000605371 583 ntBASIC11.09□□□□□ -0.63
RS1O15537 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 AC074044.1-201ENST00000609673 707 ntBASIC11.09□□□□□ -0.63
RS1O15537 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC11.09□□□□□ -0.63
RS1O15537 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC11.09□□□□□ -0.63
RS1O15537 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC11.09□□□□□ -0.63
RS1O15537 AF228730.6-201ENST00000641497 218 ntBASIC11.09□□□□□ -0.63
RS1O15537 AC084121.3-201ENST00000641716 218 ntBASIC11.09□□□□□ -0.63
RS1O15537 AC134684.3-201ENST00000641758 218 ntBASIC11.09□□□□□ -0.63
RS1O15537 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
RS1O15537 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC11.09□□□□□ -0.63
RS1O15537 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC11.09□□□□□ -0.63
RS1O15537 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC11.09□□□□□ -0.63
RS1O15537 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
RS1O15537 ABR-205ENST00000544583 5595 ntTSL 2 BASIC11.09□□□□□ -0.63
RS1O15537 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC11.09□□□□□ -0.63
RS1O15537 AC106881.1-201ENST00000605849 3329 ntBASIC11.09□□□□□ -0.63
RS1O15537 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RS1O15537 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
RS1O15537 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC11.08□□□□□ -0.64
RS1O15537 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RS1O15537 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC11.08□□□□□ -0.64
RS1O15537 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RS1O15537 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC11.08□□□□□ -0.64
RS1O15537 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RS1O15537 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms