Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A1O14983 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A1O14983 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A1O14983 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
ATP2A1O14983 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A1O14983 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A1O14983 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ATP2A1O14983 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ATP2A1O14983 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.42■□□□□ 0.38
ATP2A1O14983 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A1O14983 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A1O14983 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ATP2A1O14983 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
ATP2A1O14983 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
ATP2A1O14983 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A1O14983 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A1O14983 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.42■□□□□ 0.38
ATP2A1O14983 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
ATP2A1O14983 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.42■□□□□ 0.38
ATP2A1O14983 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
ATP2A1O14983 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.42■□□□□ 0.38
ATP2A1O14983 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.42■□□□□ 0.38
ATP2A1O14983 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.42■□□□□ 0.38
ATP2A1O14983 SCARNA20.5-201ENST00000516991 142 ntBASIC17.42■□□□□ 0.38
ATP2A1O14983 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.42■□□□□ 0.38
ATP2A1O14983 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.42■□□□□ 0.38
ATP2A1O14983 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.42■□□□□ 0.38
ATP2A1O14983 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.42■□□□□ 0.38
ATP2A1O14983 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.42■□□□□ 0.38
ATP2A1O14983 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.42■□□□□ 0.38
ATP2A1O14983 AC004466.1-201ENST00000599515 1080 ntBASIC17.42■□□□□ 0.38
ATP2A1O14983 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.42■□□□□ 0.38
ATP2A1O14983 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
ATP2A1O14983 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A1O14983 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
ATP2A1O14983 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A1O14983 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A1O14983 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A1O14983 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A1O14983 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
ATP2A1O14983 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.42■□□□□ 0.38
ATP2A1O14983 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A1O14983 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A1O14983 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A1O14983 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A1O14983 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A1O14983 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.42■□□□□ 0.38
ATP2A1O14983 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A1O14983 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A1O14983 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A1O14983 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.41■□□□□ 0.38
ATP2A1O14983 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A1O14983 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
ATP2A1O14983 REXO1L5P-201ENST00000622260 2098 ntBASIC17.41■□□□□ 0.38
ATP2A1O14983 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.41■□□□□ 0.38
ATP2A1O14983 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A1O14983 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A1O14983 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A1O14983 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.41■□□□□ 0.38
ATP2A1O14983 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A1O14983 AP000593.2-201ENST00000542775 1433 ntBASIC17.41■□□□□ 0.38
ATP2A1O14983 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.41■□□□□ 0.38
ATP2A1O14983 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
ATP2A1O14983 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A1O14983 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A1O14983 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A1O14983 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A1O14983 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A1O14983 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A1O14983 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A1O14983 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.41■□□□□ 0.38
ATP2A1O14983 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A1O14983 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
ATP2A1O14983 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A1O14983 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.41■□□□□ 0.38
ATP2A1O14983 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ATP2A1O14983 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.41■□□□□ 0.38
ATP2A1O14983 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A1O14983 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ATP2A1O14983 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.41■□□□□ 0.38
ATP2A1O14983 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A1O14983 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.41■□□□□ 0.38
ATP2A1O14983 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A1O14983 AC026434.2-201ENST00000506094 1078 ntBASIC17.41■□□□□ 0.38
ATP2A1O14983 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.41■□□□□ 0.38
ATP2A1O14983 AC008741.2-201ENST00000612792 3115 ntBASIC17.41■□□□□ 0.38
ATP2A1O14983 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ATP2A1O14983 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A1O14983 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.41■□□□□ 0.38
ATP2A1O14983 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A1O14983 AC090616.6-203ENST00000579186 1945 ntBASIC17.41■□□□□ 0.38
ATP2A1O14983 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A1O14983 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A1O14983 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
ATP2A1O14983 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A1O14983 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A1O14983 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A1O14983 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
ATP2A1O14983 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A1O14983 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms