Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CHL1O00533 AL136309.1-201ENST00000403917 691 ntBASIC19.45■□□□□ 0.7
CHL1O00533 AC108725.1-201ENST00000495472 409 ntBASIC19.45■□□□□ 0.7
CHL1O00533 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CHL1O00533 RIT1-205ENST00000539040 919 ntTSL 2 BASIC19.45■□□□□ 0.7
CHL1O00533 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CHL1O00533 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHL1O00533 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC19.45■□□□□ 0.7
CHL1O00533 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC19.45■□□□□ 0.7
CHL1O00533 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC19.45■□□□□ 0.7
CHL1O00533 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC19.45■□□□□ 0.7
CHL1O00533 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CHL1O00533 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHL1O00533 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC19.45■□□□□ 0.7
CHL1O00533 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CHL1O00533 TCAF2P1-201ENST00000291129 2421 ntBASIC19.45■□□□□ 0.7
CHL1O00533 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHL1O00533 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHL1O00533 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
CHL1O00533 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC19.45■□□□□ 0.7
CHL1O00533 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHL1O00533 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHL1O00533 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHL1O00533 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.44■□□□□ 0.7
CHL1O00533 AC011270.2-201ENST00000624293 2550 ntBASIC19.44■□□□□ 0.7
CHL1O00533 AC046158.3-201ENST00000624947 2558 ntBASIC19.44■□□□□ 0.7
CHL1O00533 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHL1O00533 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHL1O00533 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHL1O00533 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHL1O00533 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC19.44■□□□□ 0.7
CHL1O00533 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHL1O00533 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CHL1O00533 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHL1O00533 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHL1O00533 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHL1O00533 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC19.44■□□□□ 0.7
CHL1O00533 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHL1O00533 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHL1O00533 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHL1O00533 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHL1O00533 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC19.44■□□□□ 0.7
CHL1O00533 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHL1O00533 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHL1O00533 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHL1O00533 TISP43-201ENST00000409793 538 ntTSL 4 BASIC19.44■□□□□ 0.7
CHL1O00533 TLE1P1-201ENST00000422965 589 ntBASIC19.44■□□□□ 0.7
CHL1O00533 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC19.44■□□□□ 0.7
CHL1O00533 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CHL1O00533 HIST2H2BB-201ENST00000449108 381 ntBASIC19.44■□□□□ 0.7
CHL1O00533 AL591846.1-201ENST00000451736 433 ntBASIC19.44■□□□□ 0.7
CHL1O00533 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHL1O00533 PACS1-203ENST00000524815 628 ntTSL 4 BASIC19.44■□□□□ 0.7
CHL1O00533 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC19.44■□□□□ 0.7
CHL1O00533 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC19.44■□□□□ 0.7
CHL1O00533 AL358472.3-201ENST00000608147 415 ntBASIC19.44■□□□□ 0.7
CHL1O00533 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHL1O00533 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC19.44■□□□□ 0.7
CHL1O00533 GSN-215ENST00000545652 2428 ntTSL 2 BASIC19.44■□□□□ 0.7
CHL1O00533 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHL1O00533 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHL1O00533 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHL1O00533 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHL1O00533 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHL1O00533 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHL1O00533 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC19.44■□□□□ 0.7
CHL1O00533 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC19.44■□□□□ 0.7
CHL1O00533 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHL1O00533 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC19.43■□□□□ 0.7
CHL1O00533 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
CHL1O00533 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHL1O00533 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHL1O00533 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC19.43■□□□□ 0.7
CHL1O00533 APOC3-202ENST00000375345 604 ntTSL 5 BASIC19.43■□□□□ 0.7
CHL1O00533 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC19.43■□□□□ 0.7
CHL1O00533 Z93015.1-201ENST00000451718 390 ntBASIC19.43■□□□□ 0.7
CHL1O00533 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHL1O00533 NCK2-206ENST00000522586 490 ntTSL 5 BASIC19.43■□□□□ 0.7
CHL1O00533 USB1-203ENST00000539737 1212 ntTSL 2 BASIC19.43■□□□□ 0.7
CHL1O00533 RNF41-210ENST00000552244 716 ntTSL 3 BASIC19.43■□□□□ 0.7
CHL1O00533 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHL1O00533 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CHL1O00533 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHL1O00533 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHL1O00533 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHL1O00533 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHL1O00533 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC19.42■□□□□ 0.7
CHL1O00533 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHL1O00533 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC19.42■□□□□ 0.7
CHL1O00533 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHL1O00533 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHL1O00533 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHL1O00533 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHL1O00533 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHL1O00533 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CHL1O00533 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CHL1O00533 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHL1O00533 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC19.42■□□□□ 0.7
CHL1O00533 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHL1O00533 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms