Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.77□□□□□ -0.05
SLC28A1O00337 AC067863.1-201ENST00000494933 530 ntBASIC14.77□□□□□ -0.05
SLC28A1O00337 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.77□□□□□ -0.05
SLC28A1O00337 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.77□□□□□ -0.05
SLC28A1O00337 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.77□□□□□ -0.05
SLC28A1O00337 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
SLC28A1O00337 AC044860.1-202ENST00000559481 777 ntBASIC14.77□□□□□ -0.05
SLC28A1O00337 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.77□□□□□ -0.05
SLC28A1O00337 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.77□□□□□ -0.05
SLC28A1O00337 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.77□□□□□ -0.05
SLC28A1O00337 AC015911.4-201ENST00000588022 1070 ntBASIC14.77□□□□□ -0.05
SLC28A1O00337 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.77□□□□□ -0.05
SLC28A1O00337 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.77□□□□□ -0.05
SLC28A1O00337 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
SLC28A1O00337 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.77□□□□□ -0.05
SLC28A1O00337 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.77□□□□□ -0.05
SLC28A1O00337 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC28A1O00337 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
SLC28A1O00337 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC28A1O00337 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.77□□□□□ -0.05
SLC28A1O00337 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
SLC28A1O00337 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC28A1O00337 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
SLC28A1O00337 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
SLC28A1O00337 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SLC28A1O00337 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SLC28A1O00337 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC28A1O00337 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC28A1O00337 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.76□□□□□ -0.05
SLC28A1O00337 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC28A1O00337 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.76□□□□□ -0.05
SLC28A1O00337 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC28A1O00337 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC28A1O00337 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC28A1O00337 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC28A1O00337 LILRP1-201ENST00000444199 1370 ntBASIC14.76□□□□□ -0.05
SLC28A1O00337 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
SLC28A1O00337 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC28A1O00337 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.76□□□□□ -0.05
SLC28A1O00337 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.76□□□□□ -0.05
SLC28A1O00337 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.76□□□□□ -0.05
SLC28A1O00337 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.76□□□□□ -0.05
SLC28A1O00337 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.76□□□□□ -0.05
SLC28A1O00337 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SLC28A1O00337 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC28A1O00337 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
SLC28A1O00337 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.76□□□□□ -0.05
SLC28A1O00337 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.76□□□□□ -0.05
SLC28A1O00337 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.76□□□□□ -0.05
SLC28A1O00337 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SLC28A1O00337 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.76□□□□□ -0.05
SLC28A1O00337 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC28A1O00337 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.76□□□□□ -0.05
SLC28A1O00337 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC28A1O00337 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC28A1O00337 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC28A1O00337 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.76□□□□□ -0.05
SLC28A1O00337 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC28A1O00337 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC28A1O00337 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC28A1O00337 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC28A1O00337 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SLC28A1O00337 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SLC28A1O00337 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.76□□□□□ -0.05
SLC28A1O00337 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
SLC28A1O00337 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SLC28A1O00337 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC28A1O00337 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC28A1O00337 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.76□□□□□ -0.05
SLC28A1O00337 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.76□□□□□ -0.05
SLC28A1O00337 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC28A1O00337 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC28A1O00337 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC28A1O00337 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC28A1O00337 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC28A1O00337 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC28A1O00337 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
SLC28A1O00337 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC28A1O00337 AC018442.1-201ENST00000421439 2061 ntBASIC14.75□□□□□ -0.05
SLC28A1O00337 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC28A1O00337 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC28A1O00337 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC28A1O00337 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.75□□□□□ -0.05
SLC28A1O00337 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
SLC28A1O00337 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC28A1O00337 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC28A1O00337 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC28A1O00337 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.75□□□□□ -0.05
SLC28A1O00337 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.75□□□□□ -0.05
SLC28A1O00337 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.75□□□□□ -0.05
SLC28A1O00337 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SLC28A1O00337 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC28A1O00337 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.75□□□□□ -0.05
SLC28A1O00337 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC28A1O00337 AL158211.3-201ENST00000607385 239 ntBASIC14.75□□□□□ -0.05
SLC28A1O00337 AL844908.2-201ENST00000609461 460 ntBASIC14.75□□□□□ -0.05
SLC28A1O00337 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC28A1O00337 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
SLC28A1O00337 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC28A1O00337 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms