Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
UPK1AO00322 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.52□□□□□ -0.09
UPK1AO00322 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.52□□□□□ -0.09
UPK1AO00322 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.09
UPK1AO00322 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.52□□□□□ -0.09
UPK1AO00322 SRD5A3P1-201ENST00000603021 949 ntBASIC14.52□□□□□ -0.09
UPK1AO00322 AC025181.2-201ENST00000606994 802 ntBASIC14.52□□□□□ -0.09
UPK1AO00322 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.52□□□□□ -0.09
UPK1AO00322 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
UPK1AO00322 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
UPK1AO00322 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
UPK1AO00322 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
UPK1AO00322 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
UPK1AO00322 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
UPK1AO00322 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
UPK1AO00322 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
UPK1AO00322 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
UPK1AO00322 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
UPK1AO00322 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
UPK1AO00322 AC010327.5-201ENST00000586923 3061 ntBASIC14.52□□□□□ -0.09
UPK1AO00322 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
UPK1AO00322 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.52□□□□□ -0.09
UPK1AO00322 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.52□□□□□ -0.09
UPK1AO00322 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
UPK1AO00322 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1AO00322 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
UPK1AO00322 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1AO00322 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1AO00322 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.51□□□□□ -0.09
UPK1AO00322 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1AO00322 AP000845.1-201ENST00000581677 2131 ntBASIC14.51□□□□□ -0.09
UPK1AO00322 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1AO00322 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1AO00322 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.51□□□□□ -0.09
UPK1AO00322 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
UPK1AO00322 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1AO00322 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1AO00322 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.51□□□□□ -0.09
UPK1AO00322 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1AO00322 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.51□□□□□ -0.09
UPK1AO00322 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1AO00322 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1AO00322 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1AO00322 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
UPK1AO00322 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.51□□□□□ -0.09
UPK1AO00322 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.51□□□□□ -0.09
UPK1AO00322 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1AO00322 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1AO00322 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.51□□□□□ -0.09
UPK1AO00322 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.51□□□□□ -0.09
UPK1AO00322 MEIS3P1-201ENST00000495167 958 ntBASIC14.51□□□□□ -0.09
UPK1AO00322 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.51□□□□□ -0.09
UPK1AO00322 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.51□□□□□ -0.09
UPK1AO00322 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1AO00322 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
UPK1AO00322 AC000095.1-201ENST00000603208 874 ntBASIC14.51□□□□□ -0.09
UPK1AO00322 AL158212.4-201ENST00000624062 1286 ntBASIC14.51□□□□□ -0.09
UPK1AO00322 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1AO00322 AL137784.3-201ENST00000623858 2288 ntBASIC14.51□□□□□ -0.09
UPK1AO00322 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
UPK1AO00322 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.51□□□□□ -0.09
UPK1AO00322 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1AO00322 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
UPK1AO00322 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1AO00322 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1AO00322 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1AO00322 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1AO00322 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.51□□□□□ -0.09
UPK1AO00322 NORAD-201ENST00000565493 5339 ntBASIC14.51□□□□□ -0.09
UPK1AO00322 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UPK1AO00322 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
UPK1AO00322 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
UPK1AO00322 AC018529.2-202ENST00000611482 3087 ntBASIC14.5□□□□□ -0.09
UPK1AO00322 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
UPK1AO00322 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
UPK1AO00322 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
UPK1AO00322 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UPK1AO00322 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UPK1AO00322 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UPK1AO00322 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.5□□□□□ -0.09
UPK1AO00322 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.5□□□□□ -0.09
UPK1AO00322 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.5□□□□□ -0.09
UPK1AO00322 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
UPK1AO00322 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.5□□□□□ -0.09
UPK1AO00322 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
UPK1AO00322 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.5□□□□□ -0.09
UPK1AO00322 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.5□□□□□ -0.09
UPK1AO00322 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.5□□□□□ -0.09
UPK1AO00322 AL391069.4-201ENST00000609583 481 ntBASIC14.5□□□□□ -0.09
UPK1AO00322 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.5□□□□□ -0.09
UPK1AO00322 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
UPK1AO00322 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UPK1AO00322 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
UPK1AO00322 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
UPK1AO00322 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
UPK1AO00322 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UPK1AO00322 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
UPK1AO00322 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UPK1AO00322 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.5□□□□□ -0.09
UPK1AO00322 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms