Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 LINC00528-201ENST00000600723 2160 ntBASIC15.9■□□□□ 0.14
YJEFN3A6XGL0 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
YJEFN3A6XGL0 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
YJEFN3A6XGL0 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.9■□□□□ 0.14
YJEFN3A6XGL0 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.9■□□□□ 0.14
YJEFN3A6XGL0 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.9■□□□□ 0.14
YJEFN3A6XGL0 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 ACE3P-201ENST00000423435 1973 ntBASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 C2orf27AP3-201ENST00000434123 579 ntBASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 AC022210.1-201ENST00000449856 793 ntBASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 AC026434.2-201ENST00000506094 1078 ntBASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 AL354718.3-201ENST00000616414 581 ntBASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 CR382287.1-201ENST00000623954 586 ntBASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
YJEFN3A6XGL0 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 AC011270.2-201ENST00000624293 2550 ntBASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 BOLA2P3-201ENST00000404566 256 ntBASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 CTBP2P5-201ENST00000454986 1264 ntBASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 AC119751.2-201ENST00000504529 210 ntBASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 KRT90P-201ENST00000549264 1064 ntBASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 AC004466.1-201ENST00000599515 1080 ntBASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 AC132938.4-201ENST00000623835 848 ntBASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
YJEFN3A6XGL0 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms