Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 SERPINA13P-202ENST00000478994 924 ntBASIC13.31□□□□□ -0.28
MBD3L3A6NE82 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 MIR4683-201ENST00000579659 81 ntBASIC13.31□□□□□ -0.28
MBD3L3A6NE82 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 AL138725.1-201ENST00000407347 1314 ntBASIC13.31□□□□□ -0.28
MBD3L3A6NE82 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 AC023024.2-201ENST00000623561 1993 ntBASIC13.31□□□□□ -0.28
MBD3L3A6NE82 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L3A6NE82 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 NFIC-211ENST00000641145 8399 ntBASIC13.3□□□□□ -0.28
MBD3L3A6NE82 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 RN7SKP230-201ENST00000365642 335 ntBASIC13.3□□□□□ -0.28
MBD3L3A6NE82 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 TLE1P1-201ENST00000422965 589 ntBASIC13.3□□□□□ -0.28
MBD3L3A6NE82 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 AC005730.2-201ENST00000564549 1184 ntBASIC13.3□□□□□ -0.28
MBD3L3A6NE82 AL136301.1-201ENST00000615830 422 ntBASIC13.3□□□□□ -0.28
MBD3L3A6NE82 SSR4P1-203ENST00000599569 2260 ntBASIC13.3□□□□□ -0.28
MBD3L3A6NE82 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 KRT8P29-201ENST00000420409 1371 ntBASIC13.3□□□□□ -0.28
MBD3L3A6NE82 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
MBD3L3A6NE82 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.29□□□□□ -0.28
MBD3L3A6NE82 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
MBD3L3A6NE82 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.29□□□□□ -0.28
MBD3L3A6NE82 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MBD3L3A6NE82 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MBD3L3A6NE82 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MBD3L3A6NE82 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
MBD3L3A6NE82 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MBD3L3A6NE82 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
MBD3L3A6NE82 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
MBD3L3A6NE82 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MBD3L3A6NE82 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
MBD3L3A6NE82 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.29□□□□□ -0.28
MBD3L3A6NE82 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MBD3L3A6NE82 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MBD3L3A6NE82 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
MBD3L3A6NE82 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MBD3L3A6NE82 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.29□□□□□ -0.28
MBD3L3A6NE82 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MBD3L3A6NE82 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MBD3L3A6NE82 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MBD3L3A6NE82 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MBD3L3A6NE82 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MBD3L3A6NE82 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
MBD3L3A6NE82 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MBD3L3A6NE82 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MBD3L3A6NE82 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms