Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC187A0A096LP49 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 CLUHP2-201ENST00000426660 1303 ntBASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 DPM3-202ENST00000368399 517 ntBASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 TUBB8P8-201ENST00000458717 1058 ntBASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 FGFR3P5-201ENST00000564496 886 ntBASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 AC022748.3-201ENST00000621828 275 ntBASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 AL353726.2-201ENST00000623259 884 ntBASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 AC127383.1-201ENST00000444697 1800 ntBASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC187A0A096LP49 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 AC092850.2-201ENST00000623821 2697 ntBASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 GHSR-202ENST00000427970 912 ntBASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 RN7SL163P-201ENST00000583100 276 ntBASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 AC026740.1-201ENST00000607068 791 ntBASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 MIR6727-201ENST00000620702 65 ntBASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCDC187A0A096LP49 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms