Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 AC025048.3-201ENST00000590609 569 ntBASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 AC005702.4-201ENST00000618393 416 ntBASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 AC073592.8-201ENST00000624126 511 ntBASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 ACE3P-201ENST00000423435 1973 ntBASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RHBDD3Q9Y3P4 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 Z97205.2-201ENST00000564697 1639 ntBASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 AC027369.6-201ENST00000525520 931 ntBASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 AL512361.1-201ENST00000554200 418 ntBASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 AC140878.1-201ENST00000565277 250 ntBASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 AC015911.4-201ENST00000588022 1070 ntBASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 AL359258.3-201ENST00000622910 2331 ntBASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 AC140479.7-201ENST00000636301 2332 ntBASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 CICP14-201ENST00000629111 2732 ntBASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RHBDD3Q9Y3P4 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
RHBDD3Q9Y3P4 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
RHBDD3Q9Y3P4 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.46□□□□□ -0.25
RHBDD3Q9Y3P4 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
RHBDD3Q9Y3P4 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.46□□□□□ -0.25
RHBDD3Q9Y3P4 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RHBDD3Q9Y3P4 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
RHBDD3Q9Y3P4 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RHBDD3Q9Y3P4 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RHBDD3Q9Y3P4 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RHBDD3Q9Y3P4 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RHBDD3Q9Y3P4 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.46□□□□□ -0.25
RHBDD3Q9Y3P4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RHBDD3Q9Y3P4 AC084364.1-201ENST00000551967 1556 ntBASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms