Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC12.43□□□□□ -0.42
FOXA2Q9Y261 AC004890.2-204ENST00000481968 304 ntBASIC12.43□□□□□ -0.42
FOXA2Q9Y261 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.43□□□□□ -0.42
FOXA2Q9Y261 STOM-203ENST00000538954 1257 ntTSL 5 BASIC12.43□□□□□ -0.42
FOXA2Q9Y261 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC12.43□□□□□ -0.42
FOXA2Q9Y261 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.43□□□□□ -0.42
FOXA2Q9Y261 NAA60-208ENST00000570819 833 ntTSL 2 BASIC12.43□□□□□ -0.42
FOXA2Q9Y261 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC12.43□□□□□ -0.42
FOXA2Q9Y261 AC025048.3-201ENST00000590609 569 ntBASIC12.43□□□□□ -0.42
FOXA2Q9Y261 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
FOXA2Q9Y261 AL355385.1-201ENST00000606123 409 ntBASIC12.43□□□□□ -0.42
FOXA2Q9Y261 AC005702.4-201ENST00000618393 416 ntBASIC12.43□□□□□ -0.42
FOXA2Q9Y261 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
FOXA2Q9Y261 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FOXA2Q9Y261 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
FOXA2Q9Y261 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.43□□□□□ -0.42
FOXA2Q9Y261 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
FOXA2Q9Y261 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.43□□□□□ -0.42
FOXA2Q9Y261 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC12.43□□□□□ -0.42
FOXA2Q9Y261 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FOXA2Q9Y261 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.43□□□□□ -0.42
FOXA2Q9Y261 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FOXA2Q9Y261 SBF1P1-201ENST00000444527 5631 ntBASIC12.43□□□□□ -0.42
FOXA2Q9Y261 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 AC009477.1-201ENST00000452936 217 ntBASIC12.42□□□□□ -0.42
FOXA2Q9Y261 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 AL109936.8-201ENST00000641772 604 ntBASIC12.42□□□□□ -0.42
FOXA2Q9Y261 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FOXA2Q9Y261 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
FOXA2Q9Y261 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
FOXA2Q9Y261 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
FOXA2Q9Y261 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
FOXA2Q9Y261 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms