Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 AC015818.8-201ENST00000587907 1519 ntBASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 TLE1-202ENST00000376484 666 ntTSL 3 BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 MRPL3P1-201ENST00000400109 1033 ntBASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 AF186996.4-201ENST00000467186 377 ntBASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 COPE-211ENST00000600932 1144 ntTSL 5 BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 AC104692.2-201ENST00000603054 253 ntBASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 AL139288.1-201ENST00000623748 933 ntBASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 TOP3BP1-201ENST00000420768 1380 ntBASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.03□□□□□ -0.32
UBQLN2Q9UHD9 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.02□□□□□ -0.32
UBQLN2Q9UHD9 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
UBQLN2Q9UHD9 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
UBQLN2Q9UHD9 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.02□□□□□ -0.32
UBQLN2Q9UHD9 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
UBQLN2Q9UHD9 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.32
UBQLN2Q9UHD9 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
UBQLN2Q9UHD9 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
UBQLN2Q9UHD9 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
UBQLN2Q9UHD9 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
UBQLN2Q9UHD9 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
UBQLN2Q9UHD9 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 SPDYE21P-201ENST00000413323 827 ntBASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 RPS2P1-201ENST00000434010 821 ntBASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 RNPS1P1-201ENST00000507437 918 ntBASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 AC021087.4-201ENST00000563761 564 ntBASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 MTDHP4-201ENST00000600287 670 ntBASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 AC148477.8-201ENST00000624298 468 ntBASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 AC015802.1-201ENST00000588104 1449 ntBASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBQLN2Q9UHD9 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms